Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.57■■□□□ 1.2
HIPK3Q9H422 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.57■■□□□ 1.2
HIPK3Q9H422 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.57■■□□□ 1.2
HIPK3Q9H422 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIPK3Q9H422 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIPK3Q9H422 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIPK3Q9H422 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIPK3Q9H422 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
HIPK3Q9H422 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIPK3Q9H422 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIPK3Q9H422 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 FAM99A-202ENST00000538190 1989 ntBASIC22.56■■□□□ 1.2
HIPK3Q9H422 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIPK3Q9H422 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIPK3Q9H422 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIPK3Q9H422 PRKY-204ENST00000533551 1019 ntBASIC22.56■■□□□ 1.2
HIPK3Q9H422 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.56■■□□□ 1.2
HIPK3Q9H422 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.56■■□□□ 1.2
HIPK3Q9H422 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIPK3Q9H422 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIPK3Q9H422 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HIPK3Q9H422 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HIPK3Q9H422 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HIPK3Q9H422 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HIPK3Q9H422 AL355075.4-201ENST00000554988 638 ntBASIC22.55■■□□□ 1.2
HIPK3Q9H422 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 RARRES2P10-201ENST00000564312 460 ntBASIC22.55■■□□□ 1.2
HIPK3Q9H422 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.55■■□□□ 1.2
HIPK3Q9H422 AC097493.4-201ENST00000641197 219 ntBASIC22.55■■□□□ 1.2
HIPK3Q9H422 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HIPK3Q9H422 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
HIPK3Q9H422 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HIPK3Q9H422 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HIPK3Q9H422 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HIPK3Q9H422 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 RCN1P1-201ENST00000400413 996 ntBASIC22.53■■□□□ 1.2
HIPK3Q9H422 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 AC012306.2-201ENST00000609350 630 ntBASIC22.53■■□□□ 1.2
HIPK3Q9H422 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.53■■□□□ 1.2
HIPK3Q9H422 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIPK3Q9H422 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.52■■□□□ 1.2
HIPK3Q9H422 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIPK3Q9H422 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIPK3Q9H422 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
HIPK3Q9H422 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.52■■□□□ 1.2
HIPK3Q9H422 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIPK3Q9H422 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.52■■□□□ 1.2
HIPK3Q9H422 AL390719.1-204ENST00000412397 1219 ntBASIC22.52■■□□□ 1.2
HIPK3Q9H422 PGM5P4-201ENST00000421970 445 ntBASIC22.52■■□□□ 1.2
HIPK3Q9H422 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.52■■□□□ 1.2
HIPK3Q9H422 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIPK3Q9H422 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.52■■□□□ 1.2
HIPK3Q9H422 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.52■■□□□ 1.19
HIPK3Q9H422 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HIPK3Q9H422 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIPK3Q9H422 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
HIPK3Q9H422 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIPK3Q9H422 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms