Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 AC011484.1-201ENST00000377652 1995 ntBASIC18.24■□□□□ 0.51
NELFAQ9H3P2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NELFAQ9H3P2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 AC007322.4-201ENST00000509611 723 ntBASIC18.23■□□□□ 0.51
NELFAQ9H3P2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NELFAQ9H3P2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 AC091799.1-201ENST00000422823 811 ntBASIC18.22■□□□□ 0.51
NELFAQ9H3P2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 AC013268.1-206ENST00000638368 961 ntBASIC18.22■□□□□ 0.51
NELFAQ9H3P2 AC112229.1-201ENST00000639295 961 ntBASIC18.22■□□□□ 0.51
NELFAQ9H3P2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NELFAQ9H3P2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 AC231657.2-201ENST00000624556 255 ntBASIC18.21■□□□□ 0.51
NELFAQ9H3P2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms