Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 AL117328.2-201ENST00000624617 1940 ntBASIC22.54■■□□□ 1.2
RNF39Q9H2S5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 KRT17P1-201ENST00000399211 1546 ntBASIC22.53■■□□□ 1.2
RNF39Q9H2S5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.53■■□□□ 1.2
RNF39Q9H2S5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 AC091874.3-201ENST00000512672 1195 ntBASIC22.53■■□□□ 1.2
RNF39Q9H2S5 MTND2P38-201ENST00000522536 667 ntBASIC22.53■■□□□ 1.2
RNF39Q9H2S5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF39Q9H2S5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 DUSP5P2-201ENST00000426873 1033 ntBASIC22.52■■□□□ 1.2
RNF39Q9H2S5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 CDV3P1-201ENST00000471403 739 ntBASIC22.52■■□□□ 1.2
RNF39Q9H2S5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 RNA5SP413-201ENST00000516373 109 ntBASIC22.52■■□□□ 1.2
RNF39Q9H2S5 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 TMEM191A-211ENST00000637163 1067 ntBASIC22.52■■□□□ 1.2
RNF39Q9H2S5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF39Q9H2S5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
RNF39Q9H2S5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RNF39Q9H2S5 MTCO1P15-201ENST00000529569 1526 ntBASIC22.52■■□□□ 1.19
RNF39Q9H2S5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 AC013470.4-201ENST00000619978 986 ntBASIC22.51■■□□□ 1.19
RNF39Q9H2S5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF39Q9H2S5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 AC097658.1-201ENST00000475555 843 ntBASIC22.5■■□□□ 1.19
RNF39Q9H2S5 AP001981.1-201ENST00000531132 738 ntBASIC22.5■■□□□ 1.19
RNF39Q9H2S5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 AC063950.1-202ENST00000600133 568 ntBASIC22.5■■□□□ 1.19
RNF39Q9H2S5 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF39Q9H2S5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.49■■□□□ 1.19
RNF39Q9H2S5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF39Q9H2S5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms