Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AL121832.2-201ENST00000610979 668 ntBASIC21.06■□□□□ 0.96
RTL3Q8N8U3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 PKD1P6-201ENST00000343738 4769 ntBASIC21.06■□□□□ 0.96
RTL3Q8N8U3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL3Q8N8U3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 AC010980.2-201ENST00000587099 1412 ntBASIC21.05■□□□□ 0.96
RTL3Q8N8U3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.05■□□□□ 0.96
RTL3Q8N8U3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL3Q8N8U3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.04■□□□□ 0.96
RTL3Q8N8U3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 AC083906.2-201ENST00000511578 360 ntBASIC21.04■□□□□ 0.96
RTL3Q8N8U3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 MIR2861-201ENST00000636310 90 ntBASIC21.04■□□□□ 0.96
RTL3Q8N8U3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL3Q8N8U3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.03■□□□□ 0.96
RTL3Q8N8U3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.03■□□□□ 0.96
RTL3Q8N8U3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 AC087633.2-202ENST00000565166 1439 ntBASIC21.03■□□□□ 0.96
RTL3Q8N8U3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTL3Q8N8U3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 AC007225.1-201ENST00000566331 1836 ntBASIC21.02■□□□□ 0.96
RTL3Q8N8U3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 GPX1P1-201ENST00000388829 606 ntBASIC21.02■□□□□ 0.96
RTL3Q8N8U3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 FP700111.2-201ENST00000619190 1892 ntBASIC21.02■□□□□ 0.96
RTL3Q8N8U3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.02■□□□□ 0.96
RTL3Q8N8U3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTL3Q8N8U3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
RTL3Q8N8U3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 MKRN4P-201ENST00000444706 1521 ntBASIC21.01■□□□□ 0.95
RTL3Q8N8U3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 CYP2T3P-201ENST00000601990 817 ntBASIC21.01■□□□□ 0.95
RTL3Q8N8U3 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.01■□□□□ 0.95
RTL3Q8N8U3 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms