Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC18Q5T9S5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
CCDC18Q5T9S5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC18Q5T9S5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC18Q5T9S5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC18Q5T9S5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC18Q5T9S5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC18Q5T9S5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC18Q5T9S5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
CCDC18Q5T9S5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC18Q5T9S5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC18Q5T9S5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC18Q5T9S5 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.95■■■□□ 2.7
CCDC18Q5T9S5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC18Q5T9S5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
CCDC18Q5T9S5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC18Q5T9S5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 AC239809.2-201ENST00000415381 517 ntBASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
CCDC18Q5T9S5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.91■■■□□ 2.7
CCDC18Q5T9S5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 Z99916.2-201ENST00000604037 246 ntBASIC31.9■■■□□ 2.7
CCDC18Q5T9S5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC18Q5T9S5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 SNORA78-201ENST00000459373 127 ntBASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms