Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 YBR085C-AYBR085C-A 258 nt3.88□□□□□ -1.79
MSH6Q03834 AIP1YMR092C 1848 nt3.88□□□□□ -1.79
MSH6Q03834 COP1YDL145C 3606 nt3.88□□□□□ -1.79
MSH6Q03834 PCF11YDR228C 1881 nt3.88□□□□□ -1.79
MSH6Q03834 KHA1YJL094C 2622 nt3.88□□□□□ -1.79
MSH6Q03834 XRN1YGL173C 4587 nt3.87□□□□□ -1.79
MSH6Q03834 YPR053CYPR053C 456 nt3.87□□□□□ -1.79
MSH6Q03834 PRP22YER013W 3438 nt3.86□□□□□ -1.79
MSH6Q03834 SEA4YBL104C 3117 nt3.86□□□□□ -1.79
MSH6Q03834 YLL032CYLL032C 2478 nt3.86□□□□□ -1.79
MSH6Q03834 PHM6YDR281C 315 nt3.86□□□□□ -1.79
MSH6Q03834 SDH6YDR379C-A 240 nt3.86□□□□□ -1.79
MSH6Q03834 TSA2YDR453C 591 nt3.86□□□□□ -1.79
MSH6Q03834 RFC3YNL290W 1023 nt3.86□□□□□ -1.79
MSH6Q03834 ISU1YPL135W 498 nt3.86□□□□□ -1.79
MSH6Q03834 YGR237CYGR237C 2358 nt3.85□□□□□ -1.79
MSH6Q03834 APE2YKL157W 2859 nt3.85□□□□□ -1.79
MSH6Q03834 TRZ1YKR079C 2517 nt3.85□□□□□ -1.79
MSH6Q03834 SPP382YLR424W 2127 nt3.85□□□□□ -1.79
MSH6Q03834 PSY1YKL076C 384 nt3.85□□□□□ -1.79
MSH6Q03834 MRP8YKL142W 660 nt3.85□□□□□ -1.79
MSH6Q03834 RPS22BYLR367W 393 nt3.85□□□□□ -1.79
MSH6Q03834 ZDS2YML109W 2829 nt3.85□□□□□ -1.79
MSH6Q03834 SUP56tL(CAA)A 82 nt3.84□□□□□ -1.79
MSH6Q03834 SUP53tL(CAA)C 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)DtL(CAA)D 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)G1tL(CAA)G1 82 nt3.84□□□□□ -1.79
MSH6Q03834 SUP54tL(CAA)G2 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)G3tL(CAA)G3 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)KtL(CAA)K 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)LtL(CAA)L 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)MtL(CAA)M 82 nt3.84□□□□□ -1.79
MSH6Q03834 tL(CAA)NtL(CAA)N 82 nt3.84□□□□□ -1.79
MSH6Q03834 YGL149WYGL149W 306 nt3.84□□□□□ -1.79
MSH6Q03834 RPA34YJL148W 702 nt3.84□□□□□ -1.79
MSH6Q03834 SQS1YNL224C 2304 nt3.84□□□□□ -1.79
MSH6Q03834 FAS1YKL182W 6156 nt3.84□□□□□ -1.79
MSH6Q03834 COX1Q0045 1605 nt3.84□□□□□ -1.8
MSH6Q03834 BYE1YKL005C 1785 nt3.84□□□□□ -1.8
MSH6Q03834 CIN1YOR349W 3045 nt3.84□□□□□ -1.8
MSH6Q03834 LCB5YLR260W 2064 nt3.83□□□□□ -1.8
MSH6Q03834 URB2YJR041C 3525 nt3.83□□□□□ -1.8
MSH6Q03834 RNR1YER070W 2667 nt3.83□□□□□ -1.8
MSH6Q03834 DAN4YJR151C 3486 nt3.83□□□□□ -1.8
MSH6Q03834 FLO10YKR102W 3510 nt3.83□□□□□ -1.8
MSH6Q03834 SYT1YPR095C 3681 nt3.83□□□□□ -1.8
MSH6Q03834 IES6YEL044W 501 nt3.83□□□□□ -1.8
MSH6Q03834 tT(UGU)Q1tT(UGU)Q1 76 nt3.83□□□□□ -1.8
MSH6Q03834 YIL066W-AYIL066W-A 444 nt3.83□□□□□ -1.8
MSH6Q03834 POG1YIL122W 1056 nt3.83□□□□□ -1.8
MSH6Q03834 TIM8YJR135W-A 264 nt3.83□□□□□ -1.8
MSH6Q03834 YAR070CYAR070C 300 nt3.83□□□□□ -1.8
MSH6Q03834 RPL26AYLR344W 384 nt3.83□□□□□ -1.8
MSH6Q03834 YOR011W-AYOR011W-A 207 nt3.83□□□□□ -1.8
MSH6Q03834 ARG2YJL071W 1725 nt3.83□□□□□ -1.8
MSH6Q03834 NMA111YNL123W 2994 nt3.83□□□□□ -1.8
MSH6Q03834 NUP159YIL115C 4383 nt3.82□□□□□ -1.8
MSH6Q03834 TMA108YIL137C 2841 nt3.82□□□□□ -1.8
MSH6Q03834 PDC2YDR081C 2778 nt3.82□□□□□ -1.8
MSH6Q03834 MSD1YPL104W 1977 nt3.82□□□□□ -1.8
MSH6Q03834 YHR078WYHR078W 1659 nt3.82□□□□□ -1.8
MSH6Q03834 YGL041CYGL041C 204 nt3.82□□□□□ -1.8
MSH6Q03834 TMA10YLR327C 261 nt3.82□□□□□ -1.8
MSH6Q03834 snR42snR42 351 nt3.82□□□□□ -1.8
MSH6Q03834 MYO3YKL129C 3819 nt3.82□□□□□ -1.8
MSH6Q03834 RDS1YCR106W 2499 nt3.81□□□□□ -1.8
MSH6Q03834 YGL074CYGL074C 327 nt3.81□□□□□ -1.8
MSH6Q03834 SSY1YDR160W 2559 nt3.81□□□□□ -1.8
MSH6Q03834 21S_rRNA21S_rRNA 3296 nt3.8□□□□□ -1.8
MSH6Q03834 RRN6YBL014C 2685 nt3.8□□□□□ -1.8
MSH6Q03834 STN1YDR082W 1485 nt3.8□□□□□ -1.8
MSH6Q03834 ATP25YMR098C 1839 nt3.8□□□□□ -1.8
MSH6Q03834 ADK1YDR226W 669 nt3.8□□□□□ -1.8
MSH6Q03834 YLR458WYLR458W 381 nt3.8□□□□□ -1.8
MSH6Q03834 ABF2YMR072W 552 nt3.8□□□□□ -1.8
MSH6Q03834 TRS65YGR166W 1683 nt3.8□□□□□ -1.8
MSH6Q03834 ATG26YLR189C 3597 nt3.8□□□□□ -1.8
MSH6Q03834 SSM4YIL030C 3960 nt3.8□□□□□ -1.8
MSH6Q03834 TRS120YDR407C 3870 nt3.8□□□□□ -1.8
MSH6Q03834 SEC15YGL233W 2733 nt3.79□□□□□ -1.8
MSH6Q03834 RPN2YIL075C 2838 nt3.79□□□□□ -1.8
MSH6Q03834 PWP2YCR057C 2772 nt3.79□□□□□ -1.8
MSH6Q03834 YEL032C-AYEL032C-A 162 nt3.79□□□□□ -1.8
MSH6Q03834 GPI13YLL031C 3054 nt3.79□□□□□ -1.8
MSH6Q03834 CCM1YGR150C 2595 nt3.79□□□□□ -1.8
MSH6Q03834 GYL1YMR192W 2163 nt3.79□□□□□ -1.8
MSH6Q03834 SPA2YLL021W 4401 nt3.79□□□□□ -1.8
MSH6Q03834 RKM1YPL208W 1752 nt3.79□□□□□ -1.8
MSH6Q03834 YCG1YDR325W 3108 nt3.78□□□□□ -1.8
MSH6Q03834 YDR464C-AYDR464C-A 189 nt3.78□□□□□ -1.8
MSH6Q03834 RSM19YNR037C 276 nt3.78□□□□□ -1.8
MSH6Q03834 NAN1YPL126W 2691 nt3.78□□□□□ -1.8
MSH6Q03834 ARP7YPR034W 1434 nt3.78□□□□□ -1.8
MSH6Q03834 PRK1YIL095W 2433 nt3.78□□□□□ -1.81
MSH6Q03834 TPS2YDR074W 2691 nt3.77□□□□□ -1.81
MSH6Q03834 TOP1YOL006C 2310 nt3.77□□□□□ -1.81
MSH6Q03834 CDC45YLR103C 1953 nt3.77□□□□□ -1.81
MSH6Q03834 STE14YDR410C 720 nt3.77□□□□□ -1.81
MSH6Q03834 COA4YLR218C 453 nt3.77□□□□□ -1.81
MSH6Q03834 ESF2YNR054C 951 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 89.7 ms