Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 RPI1YIL119C 1224 nt2.62□□□□□ -1.99 RIP-Chip
SCD6P45978 MRP49YKL167C 414 nt2.62□□□□□ -1.99
SCD6P45978 YLR230WYLR230W 306 nt2.62□□□□□ -1.99
SCD6P45978 YLR302CYLR302C 363 nt2.62□□□□□ -1.99
SCD6P45978 YMR052C-AYMR052C-A 366 nt2.62□□□□□ -1.99
SCD6P45978 HHT2YNL031C 411 nt2.62□□□□□ -1.99
SCD6P45978 RIO2YNL207W 1278 nt2.62□□□□□ -1.99
SCD6P45978 YOL150CYOL150C 312 nt2.62□□□□□ -1.99
SCD6P45978 YBR209WYBR209W 318 nt2.62□□□□□ -1.99
SCD6P45978 GDS1YOR355W 1569 nt2.61□□□□□ -1.99
SCD6P45978 BFR1YOR198C 1413 nt2.61□□□□□ -1.99 RIP-Chip
SCD6P45978 TRZ1YKR079C 2517 nt2.61□□□□□ -1.99 RIP-Chip
SCD6P45978 YER084W-AYER084W-A 513 nt2.61□□□□□ -1.99
SCD6P45978 SPC1YJR010C-A 285 nt2.61□□□□□ -1.99
SCD6P45978 YAL037WYAL037W 804 nt2.61□□□□□ -1.99 RIP-Chip
SCD6P45978 ARV1YLR242C 966 nt2.61□□□□□ -1.99
SCD6P45978 DDR48YMR173W 1293 nt2.61□□□□□ -1.99
SCD6P45978 YOR055WYOR055W 435 nt2.61□□□□□ -1.99
SCD6P45978 YPL034WYPL034W 498 nt2.61□□□□□ -1.99
SCD6P45978 PRM3YPL192C 402 nt2.61□□□□□ -1.99
SCD6P45978 YPR014CYPR014C 330 nt2.61□□□□□ -1.99
SCD6P45978 snR191snR191 274 nt2.61□□□□□ -1.99
SCD6P45978 DBP7YKR024C 2229 nt2.61□□□□□ -1.99 RIP-Chip
SCD6P45978 SRC1YML034W 2505 nt2.61□□□□□ -1.99 RIP-Chip
SCD6P45978 HPA3YEL066W 540 nt2.6□□□□□ -1.99
SCD6P45978 YHC1YLR298C 696 nt2.6□□□□□ -1.99
SCD6P45978 snR41snR41 95 nt2.6□□□□□ -1.99
SCD6P45978 BOI1YBL085W 2943 nt2.6□□□□□ -1.99
SCD6P45978 NUP170YBL079W 4509 nt2.6□□□□□ -1.99 RIP-Chip
SCD6P45978 YCR081C-AYCR081C-A 237 nt2.59□□□□□ -1.99
SCD6P45978 YIL156W-BYIL156W-B 222 nt2.59□□□□□ -1.99
SCD6P45978 PAU14YIL176C 363 nt2.59□□□□□ -1.99 RIP-Chip
SCD6P45978 PAU1YJL223C 363 nt2.59□□□□□ -1.99
SCD6P45978 YKL063CYKL063C 504 nt2.59□□□□□ -1.99
SCD6P45978 YBR076C-AYBR076C-A 267 nt2.59□□□□□ -1.99
SCD6P45978 ARP8YOR141C 2646 nt2.59□□□□□ -1.99 RIP-Chip
SCD6P45978 SRO77YBL106C 3033 nt2.59□□□□□ -2 RIP-Chip
SCD6P45978 CWC22YGR278W 1734 nt2.59□□□□□ -2 RIP-Chip
SCD6P45978 PHO91YNR013C 2685 nt2.58□□□□□ -2 RIP-Chip
SCD6P45978 CDC55YGL190C 1581 nt2.58□□□□□ -2 RIP-Chip
SCD6P45978 SCP160YJL080C 3669 nt2.58□□□□□ -2
SCD6P45978 YER038W-AYER038W-A 381 nt2.58□□□□□ -2
SCD6P45978 ERG28YER044C 447 nt2.58□□□□□ -2
SCD6P45978 YER107W-AYER107W-A 321 nt2.58□□□□□ -2
SCD6P45978 TMN3YER113C 2121 nt2.58□□□□□ -2 RIP-Chip
SCD6P45978 ECL1YGR146C 636 nt2.58□□□□□ -2
SCD6P45978 BIG1YHR101C 1008 nt2.58□□□□□ -2
SCD6P45978 PSY1YKL076C 384 nt2.58□□□□□ -2
SCD6P45978 LSM2YBL026W 288 nt2.58□□□□□ -2
SCD6P45978 NOP15YNL110C 663 nt2.58□□□□□ -2 RIP-Chip
SCD6P45978 YNR021WYNR021W 1215 nt2.58□□□□□ -2
SCD6P45978 HSP10YOR020C 321 nt2.58□□□□□ -2
SCD6P45978 MET6YER091C 2304 nt2.58□□□□□ -2
SCD6P45978 NDT80YHR124W 1884 nt2.58□□□□□ -2 RIP-Chip
SCD6P45978 PFF1YBR074W 2931 nt2.58□□□□□ -2
SCD6P45978 OSW7YFR039C 1533 nt2.58□□□□□ -2
SCD6P45978 GEA1YJR031C 4227 nt2.57□□□□□ -2 RIP-Chip
SCD6P45978 snR56snR56 88 nt2.57□□□□□ -2
SCD6P45978 YKL068W-AYKL068W-A 237 nt2.57□□□□□ -2
SCD6P45978 MUD2YKL074C 1584 nt2.57□□□□□ -2
SCD6P45978 RPL29YFR032C-A 180 nt2.56□□□□□ -2
SCD6P45978 RTS3YGR161C 792 nt2.56□□□□□ -2
SCD6P45978 YML108WYML108W 318 nt2.56□□□□□ -2
SCD6P45978 IGO1YNL157W 507 nt2.56□□□□□ -2
SCD6P45978 FYV12YOR183W 390 nt2.56□□□□□ -2
SCD6P45978 YPL080CYPL080C 327 nt2.56□□□□□ -2
SCD6P45978 IRC16YPR038W 360 nt2.56□□□□□ -2
SCD6P45978 SEN54YPL083C 1404 nt2.56□□□□□ -2 RIP-Chip
SCD6P45978 SNF12YNR023W 1701 nt2.56□□□□□ -2 RIP-Chip
SCD6P45978 YDR114CYDR114C 303 nt2.55□□□□□ -2
SCD6P45978 RAD6YGL058W 519 nt2.55□□□□□ -2
SCD6P45978 CCT7YJL111W 1653 nt2.55□□□□□ -2 RIP-Chip
SCD6P45978 AIM29YKR074W 468 nt2.55□□□□□ -2
SCD6P45978 PKR1YMR123W 369 nt2.55□□□□□ -2
SCD6P45978 SAS2YMR127C 1017 nt2.55□□□□□ -2
SCD6P45978 SIP3YNL257C 3690 nt2.55□□□□□ -2 RIP-Chip
SCD6P45978 BNA4YBL098W 1383 nt2.55□□□□□ -2
SCD6P45978 MRD1YPR112C 2664 nt2.55□□□□□ -2
SCD6P45978 UTP14YML093W 2700 nt2.55□□□□□ -2 RIP-Chip
SCD6P45978 KEL2YGR238C 2649 nt2.55□□□□□ -2
SCD6P45978 IRA2YOL081W 9240 nt2.54□□□□□ -2
SCD6P45978 YKR078WYKR078W 1758 nt2.54□□□□□ -2 RIP-Chip
SCD6P45978 MSB1YOR188W 3414 nt2.54□□□□□ -2 RIP-Chip
SCD6P45978 ERV1YGR029W 570 nt2.54□□□□□ -2
SCD6P45978 YMR153C-AYMR153C-A 336 nt2.54□□□□□ -2
SCD6P45978 RSA1YPL193W 1146 nt2.54□□□□□ -2
SCD6P45978 snR54snR54 86 nt2.54□□□□□ -2
SCD6P45978 RCY1YJL204C 2523 nt2.54□□□□□ -2
SCD6P45978 UTP13YLR222C 2454 nt2.54□□□□□ -2 RIP-Chip
SCD6P45978 PPN1YDR452W 2025 nt2.54□□□□□ -2
SCD6P45978 APL5YPL195W 2799 nt2.53□□□□□ -2 RIP-Chip
SCD6P45978 YCR064CYCR064C 411 nt2.53□□□□□ -2
SCD6P45978 TIF35YDR429C 825 nt2.53□□□□□ -2
SCD6P45978 GET1YGL020C 708 nt2.53□□□□□ -2
SCD6P45978 YLR154W-FYLR154W-F 141 nt2.53□□□□□ -2
SCD6P45978 PEP12YOR036W 867 nt2.53□□□□□ -2
SCD6P45978 YPL039WYPL039W 951 nt2.53□□□□□ -2
SCD6P45978 YPR203WYPR203W 309 nt2.53□□□□□ -2
SCD6P45978 NPR1YNL183C 2373 nt2.53□□□□□ -2
SCD6P45978 YOL057WYOL057W 2136 nt2.53□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 54.3 ms