Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	LCL2	YLR104W	396 nt		2.98	□□□□□ -1.93
SKP2	P42843	ARV1	YLR242C	966 nt		2.98	□□□□□ -1.93
SKP2	P42843	YOL150C	YOL150C	312 nt		2.98	□□□□□ -1.93
SKP2	P42843	SEN54	YPL083C	1404 nt		2.98	□□□□□ -1.93
SKP2	P42843	NMA111	YNL123W	2994 nt		2.98	□□□□□ -1.93
SKP2	P42843	PMR1	YGL167C	2853 nt		2.97	□□□□□ -1.93
SKP2	P42843	YCR081C-A	YCR081C-A	237 nt		2.97	□□□□□ -1.93
SKP2	P42843	BIG1	YHR101C	1008 nt		2.97	□□□□□ -1.93
SKP2	P42843	YHR138C	YHR138C	345 nt		2.97	□□□□□ -1.93
SKP2	P42843	YIL175W	YIL175W	318 nt		2.97	□□□□□ -1.93
SKP2	P42843	YJL222W-B	YJL222W-B	138 nt		2.97	□□□□□ -1.93
SKP2	P42843	SPC1	YJR010C-A	285 nt		2.97	□□□□□ -1.93
SKP2	P42843	LSM2	YBL026W	288 nt		2.97	□□□□□ -1.93
SKP2	P42843	DDR48	YMR173W	1293 nt		2.97	□□□□□ -1.93
SKP2	P42843	RPL20A	YMR242C	519 nt		2.97	□□□□□ -1.93
SKP2	P42843	YNL146W	YNL146W	303 nt		2.97	□□□□□ -1.93
SKP2	P42843	RPL20B	YOR312C	519 nt		2.97	□□□□□ -1.93
SKP2	P42843	RPN1	YHR027C	2982 nt		2.97	□□□□□ -1.93
SKP2	P42843	SNF12	YNR023W	1701 nt		2.96	□□□□□ -1.93
SKP2	P42843	ICR1	ICR1	3199 nt		2.96	□□□□□ -1.94
SKP2	P42843	CDC55	YGL190C	1581 nt		2.96	□□□□□ -1.94
SKP2	P42843	BFR1	YOR198C	1413 nt		2.96	□□□□□ -1.94
SKP2	P42843	HPA3	YEL066W	540 nt		2.96	□□□□□ -1.94
SKP2	P42843	YHL006W-A	YHL006W-A	354 nt		2.96	□□□□□ -1.94
SKP2	P42843	YHR125W	YHR125W	306 nt		2.96	□□□□□ -1.94
SKP2	P42843	RNP1	YLL046C	750 nt		2.96	□□□□□ -1.94
SKP2	P42843	YLR230W	YLR230W	306 nt		2.96	□□□□□ -1.94
SKP2	P42843	YMR153C-A	YMR153C-A	336 nt		2.96	□□□□□ -1.94
SKP2	P42843	TCB2	YNL087W	3537 nt		2.96	□□□□□ -1.94
SKP2	P42843	RGR1	YLR071C	3249 nt		2.96	□□□□□ -1.94
SKP2	P42843	MES1	YGR264C	2256 nt		2.95	□□□□□ -1.94
SKP2	P42843	GUP1	YGL084C	1683 nt		2.95	□□□□□ -1.94
SKP2	P42843	RPL29	YFR032C-A	180 nt		2.95	□□□□□ -1.94
SKP2	P42843	YJL127C-B	YJL127C-B	159 nt		2.95	□□□□□ -1.94
SKP2	P42843	YAL037W	YAL037W	804 nt		2.95	□□□□□ -1.94
SKP2	P42843	BET3	YKR068C	582 nt		2.95	□□□□□ -1.94
SKP2	P42843	YML099W-A	YML099W-A	330 nt		2.95	□□□□□ -1.94
SKP2	P42843	YML108W	YML108W	318 nt		2.95	□□□□□ -1.94
SKP2	P42843	TIF11	YMR260C	462 nt		2.95	□□□□□ -1.94
SKP2	P42843	YOL159C	YOL159C	516 nt		2.95	□□□□□ -1.94
SKP2	P42843	ARR2	YPR200C	393 nt		2.95	□□□□□ -1.94
SKP2	P42843	GPX2	YBR244W	489 nt		2.95	□□□□□ -1.94
SKP2	P42843	YPL150W	YPL150W	2706 nt		2.94	□□□□□ -1.94
SKP2	P42843	RTR2	YDR066C	591 nt		2.94	□□□□□ -1.94
SKP2	P42843	GCD6	YDR211W	2139 nt		2.94	□□□□□ -1.94
SKP2	P42843	YMR31	YFR049W	372 nt		2.94	□□□□□ -1.94
SKP2	P42843	ECL1	YGR146C	636 nt		2.94	□□□□□ -1.94
SKP2	P42843	BOI1	YBL085W	2943 nt		2.94	□□□□□ -1.94
SKP2	P42843	FKS3	YMR306W	5358 nt		2.94	□□□□□ -1.94
SKP2	P42843	RIF1	YBR275C	5751 nt		2.93	□□□□□ -1.94
SKP2	P42843	YKR078W	YKR078W	1758 nt		2.93	□□□□□ -1.94
SKP2	P42843	YGR121W-A	YGR121W-A	216 nt		2.93	□□□□□ -1.94
SKP2	P42843	RTS3	YGR161C	792 nt		2.93	□□□□□ -1.94
SKP2	P42843	LAG1	YHL003C	1236 nt		2.93	□□□□□ -1.94
SKP2	P42843	TCD1	YHR003C	1290 nt		2.93	□□□□□ -1.94
SKP2	P42843	YAL026C-A	YAL026C-A	438 nt		2.93	□□□□□ -1.94
SKP2	P42843	PKR1	YMR123W	369 nt		2.93	□□□□□ -1.94
SKP2	P42843	YPL185W	YPL185W	396 nt		2.93	□□□□□ -1.94
SKP2	P42843	DYN1	YKR054C	12279 nt		2.92	□□□□□ -1.94
SKP2	P42843	KAP104	YBR017C	2757 nt		2.92	□□□□□ -1.94
SKP2	P42843	YOL057W	YOL057W	2136 nt		2.92	□□□□□ -1.94
SKP2	P42843	FAR1	YJL157C	2493 nt		2.92	□□□□□ -1.94
SKP2	P42843	SWM2	YNR004W	441 nt		2.92	□□□□□ -1.94
SKP2	P42843	HSP10	YOR020C	321 nt		2.92	□□□□□ -1.94
SKP2	P42843	YOR248W	YOR248W	303 nt		2.92	□□□□□ -1.94
SKP2	P42843	snR54	snR54	86 nt		2.92	□□□□□ -1.94
SKP2	P42843	OSW7	YFR039C	1533 nt		2.92	□□□□□ -1.94
SKP2	P42843	SLN1	YIL147C	3663 nt		2.92	□□□□□ -1.94
SKP2	P42843	SWF1	YDR126W	1011 nt		2.91	□□□□□ -1.94
SKP2	P42843	YLR101C	YLR101C	396 nt		2.91	□□□□□ -1.94
SKP2	P42843	CMC2	YBL059C-A	330 nt		2.91	□□□□□ -1.94
SKP2	P42843	YOR199W	YOR199W	330 nt		2.91	□□□□□ -1.94
SKP2	P42843	YPL080C	YPL080C	327 nt		2.91	□□□□□ -1.94
SKP2	P42843	ISU1	YPL135W	498 nt		2.91	□□□□□ -1.94
SKP2	P42843	YHR214C-C	YHR214C-C	1437 nt		2.91	□□□□□ -1.94
SKP2	P42843	STE11	YLR362W	2154 nt		2.91	□□□□□ -1.94
SKP2	P42843	HAA1	YPR008W	2085 nt		2.91	□□□□□ -1.94
SKP2	P42843	CWC22	YGR278W	1734 nt		2.9	□□□□□ -1.94
SKP2	P42843	NPR3	YHL023C	3441 nt		2.9	□□□□□ -1.94
SKP2	P42843	DRS2	YAL026C	4068 nt		2.9	□□□□□ -1.95
SKP2	P42843	TIM11	YDR322C-A	291 nt		2.9	□□□□□ -1.95
SKP2	P42843	YER068C-A	YER068C-A	432 nt		2.9	□□□□□ -1.95
SKP2	P42843	RAD6	YGL058W	519 nt		2.9	□□□□□ -1.95
SKP2	P42843	YHR032W-A	YHR032W-A	180 nt		2.9	□□□□□ -1.95
SKP2	P42843	AYT1	YLL063C	1425 nt		2.9	□□□□□ -1.95
SKP2	P42843	UTP13	YLR222C	2454 nt		2.9	□□□□□ -1.95
SKP2	P42843	YLR001C	YLR001C	2589 nt		2.89	□□□□□ -1.95
SKP2	P42843	DYN2	YDR424C	279 nt		2.89	□□□□□ -1.95
SKP2	P42843	GPI19	YDR437W	423 nt		2.89	□□□□□ -1.95
SKP2	P42843	YEL018C-A	YEL018C-A	534 nt		2.89	□□□□□ -1.95
SKP2	P42843	YPS5	YGL259W	498 nt		2.89	□□□□□ -1.95
SKP2	P42843	RNR4	YGR180C	1038 nt		2.89	□□□□□ -1.95
SKP2	P42843	PEP8	YJL053W	1140 nt		2.89	□□□□□ -1.95
SKP2	P42843	PHD1	YKL043W	1101 nt		2.89	□□□□□ -1.95
SKP2	P42843	EMC6	YLL014W	327 nt		2.89	□□□□□ -1.95
SKP2	P42843	JIP3	YLR331C	378 nt		2.89	□□□□□ -1.95
SKP2	P42843	RPB11	YOL005C	363 nt		2.89	□□□□□ -1.95
SKP2	P42843	SEC7	YDR170C	6030 nt		2.89	□□□□□ -1.95
SKP2	P42843	TAO3	YIL129C	7131 nt		2.89	□□□□□ -1.95
SKP2	P42843	BUD4	YJR092W	4344 nt		2.88	□□□□□ -1.95

Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms