Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
HOXC6P09630 TSPY7P-201ENST00000431358 1114 ntBASIC23.33■■□□□ 1.33
HOXC6P09630 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.33■■□□□ 1.33
HOXC6P09630 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.33■■□□□ 1.33
HOXC6P09630 AP001412.1-201ENST00000608405 714 ntBASIC23.33■■□□□ 1.33
HOXC6P09630 AL023875.1-201ENST00000640777 796 ntBASIC23.33■■□□□ 1.33
HOXC6P09630 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 AC012676.1-201ENST00000574705 1949 ntBASIC23.33■■□□□ 1.32
HOXC6P09630 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HOXC6P09630 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
HOXC6P09630 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.33■■□□□ 1.32
HOXC6P09630 AL135905.2-201ENST00000584934 1404 ntBASIC23.33■■□□□ 1.32
HOXC6P09630 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.33■■□□□ 1.32
HOXC6P09630 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
HOXC6P09630 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
HOXC6P09630 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.32■■□□□ 1.32
HOXC6P09630 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HOXC6P09630 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
HOXC6P09630 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HOXC6P09630 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.32■■□□□ 1.32
HOXC6P09630 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.32■■□□□ 1.32
HOXC6P09630 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
HOXC6P09630 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HOXC6P09630 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HOXC6P09630 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
HOXC6P09630 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
HOXC6P09630 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.31■■□□□ 1.32
HOXC6P09630 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
HOXC6P09630 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
HOXC6P09630 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
HOXC6P09630 GUSBP5-202ENST00000510805 1989 ntBASIC23.31■■□□□ 1.32
HOXC6P09630 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
HOXC6P09630 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 AC239809.2-201ENST00000415381 517 ntBASIC23.31■■□□□ 1.32
HOXC6P09630 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
HOXC6P09630 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
HOXC6P09630 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.31■■□□□ 1.32
HOXC6P09630 AC110285.5-201ENST00000611501 352 ntBASIC23.31■■□□□ 1.32
HOXC6P09630 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
HOXC6P09630 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.31■■□□□ 1.32
HOXC6P09630 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
HOXC6P09630 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.31■■□□□ 1.32
HOXC6P09630 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HOXC6P09630 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.31■■□□□ 1.32
HOXC6P09630 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.31■■□□□ 1.32
HOXC6P09630 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.3■■□□□ 1.32
HOXC6P09630 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
HOXC6P09630 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.3■■□□□ 1.32
HOXC6P09630 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
HOXC6P09630 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
HOXC6P09630 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.3■■□□□ 1.32
HOXC6P09630 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.3■■□□□ 1.32
HOXC6P09630 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.3■■□□□ 1.32
HOXC6P09630 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.3■■□□□ 1.32
HOXC6P09630 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
HOXC6P09630 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HOXC6P09630 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.3■■□□□ 1.32
HOXC6P09630 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
HOXC6P09630 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
HOXC6P09630 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.29■■□□□ 1.32
HOXC6P09630 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.29■■□□□ 1.32
HOXC6P09630 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.29■■□□□ 1.32
HOXC6P09630 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.29■■□□□ 1.32
HOXC6P09630 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
HOXC6P09630 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.29■■□□□ 1.32
HOXC6P09630 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HOXC6P09630 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
HOXC6P09630 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HOXC6P09630 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HOXC6P09630 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.28■■□□□ 1.32
HOXC6P09630 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HOXC6P09630 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
HOXC6P09630 PGM5P4-201ENST00000421970 445 ntBASIC23.28■■□□□ 1.32
HOXC6P09630 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HOXC6P09630 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms