Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.14■□□□□ 0.49
ERCC1P07992 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.14■□□□□ 0.49
ERCC1P07992 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ERCC1P07992 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.14■□□□□ 0.49
ERCC1P07992 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
ERCC1P07992 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.13■□□□□ 0.49
ERCC1P07992 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.13■□□□□ 0.49
ERCC1P07992 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.13■□□□□ 0.49
ERCC1P07992 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.13■□□□□ 0.49
ERCC1P07992 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.13■□□□□ 0.49
ERCC1P07992 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ERCC1P07992 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ERCC1P07992 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.13■□□□□ 0.49
ERCC1P07992 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ERCC1P07992 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
ERCC1P07992 FEM1AP1-201ENST00000431297 1995 ntBASIC18.13■□□□□ 0.49
ERCC1P07992 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ERCC1P07992 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC1P07992 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC1P07992 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ERCC1P07992 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.12■□□□□ 0.49
ERCC1P07992 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC1P07992 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC1P07992 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ERCC1P07992 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC1P07992 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC1P07992 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC1P07992 AC006128.1-201ENST00000624704 1661 ntBASIC18.12■□□□□ 0.49
ERCC1P07992 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ERCC1P07992 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ERCC1P07992 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.11■□□□□ 0.49
ERCC1P07992 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.11■□□□□ 0.49
ERCC1P07992 AC026185.1-201ENST00000445748 174 ntBASIC18.11■□□□□ 0.49
ERCC1P07992 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC1P07992 KRT18P61-201ENST00000585825 1298 ntBASIC18.11■□□□□ 0.49
ERCC1P07992 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 AP001160.3-201ENST00000601484 763 ntBASIC18.11■□□□□ 0.49
ERCC1P07992 AC011767.1-201ENST00000617410 1153 ntBASIC18.11■□□□□ 0.49
ERCC1P07992 AC120498.10-201ENST00000621827 505 ntBASIC18.11■□□□□ 0.49
ERCC1P07992 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.11■□□□□ 0.49
ERCC1P07992 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC1P07992 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
ERCC1P07992 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC1P07992 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC1P07992 LINC01006-201ENST00000333319 2292 ntBASIC18.1■□□□□ 0.49
ERCC1P07992 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.1■□□□□ 0.49
ERCC1P07992 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC1P07992 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC1P07992 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ERCC1P07992 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC1P07992 AC006970.2-201ENST00000450065 779 ntBASIC18.1■□□□□ 0.49
ERCC1P07992 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC1P07992 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC1P07992 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ERCC1P07992 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC1P07992 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC1P07992 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ERCC1P07992 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC1P07992 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC1P07992 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC1P07992 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms