Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN1O95832 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN1O95832 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN1O95832 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN1O95832 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN1O95832 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN1O95832 CD177P1-201ENST00000606252 935 ntBASIC18.32■□□□□ 0.52
CLDN1O95832 FAM21FP-204ENST00000608637 956 ntBASIC18.32■□□□□ 0.52
CLDN1O95832 AL589743.5-201ENST00000616611 1050 ntBASIC18.32■□□□□ 0.52
CLDN1O95832 AC100791.3-201ENST00000617619 330 ntBASIC18.32■□□□□ 0.52
CLDN1O95832 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN1O95832 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN1O95832 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN1O95832 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN1O95832 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN1O95832 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN1O95832 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN1O95832 AL355075.4-201ENST00000554988 638 ntBASIC18.31■□□□□ 0.52
CLDN1O95832 C2orf69P4-201ENST00000565394 541 ntBASIC18.31■□□□□ 0.52
CLDN1O95832 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN1O95832 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN1O95832 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN1O95832 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN1O95832 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CLDN1O95832 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 AC061975.6-201ENST00000579045 1553 ntBASIC18.3■□□□□ 0.52
CLDN1O95832 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN1O95832 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN1O95832 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN1O95832 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN1O95832 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CLDN1O95832 AP001412.1-201ENST00000608405 714 ntBASIC18.3■□□□□ 0.52
CLDN1O95832 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN1O95832 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN1O95832 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CLDN1O95832 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN1O95832 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN1O95832 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN1O95832 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN1O95832 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN1O95832 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN1O95832 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN1O95832 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN1O95832 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN1O95832 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN1O95832 AC113410.3-201ENST00000623366 203 ntBASIC18.29■□□□□ 0.52
CLDN1O95832 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLDN1O95832 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN1O95832 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN1O95832 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN1O95832 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN1O95832 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN1O95832 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN1O95832 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLDN1O95832 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN1O95832 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN1O95832 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN1O95832 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN1O95832 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms