Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB3O75112 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB3O75112 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.32■□□□□ 0.68
LDB3O75112 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB3O75112 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 RARRES2P4-201ENST00000514074 484 ntBASIC19.32■□□□□ 0.68
LDB3O75112 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 AC069236.1-201ENST00000604339 616 ntBASIC19.32■□□□□ 0.68
LDB3O75112 AC008694.1-202ENST00000636953 945 ntBASIC19.32■□□□□ 0.68
LDB3O75112 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.32■□□□□ 0.68
LDB3O75112 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB3O75112 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB3O75112 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB3O75112 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.31■□□□□ 0.68
LDB3O75112 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LDB3O75112 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LDB3O75112 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.31■□□□□ 0.68
LDB3O75112 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LDB3O75112 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB3O75112 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB3O75112 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
LDB3O75112 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.31■□□□□ 0.68
LDB3O75112 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LDB3O75112 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
LDB3O75112 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LDB3O75112 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.3■□□□□ 0.68
LDB3O75112 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.3■□□□□ 0.68
LDB3O75112 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.3■□□□□ 0.68
LDB3O75112 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LDB3O75112 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDB3O75112 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LDB3O75112 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.29■□□□□ 0.68
LDB3O75112 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.29■□□□□ 0.68
LDB3O75112 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LDB3O75112 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.29■□□□□ 0.68
LDB3O75112 AC093787.1-201ENST00000450396 207 ntBASIC19.29■□□□□ 0.68
LDB3O75112 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.29■□□□□ 0.68
LDB3O75112 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.29■□□□□ 0.68
LDB3O75112 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LDB3O75112 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.29■□□□□ 0.68
LDB3O75112 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB3O75112 FP700111.2-201ENST00000619190 1892 ntBASIC19.28■□□□□ 0.68
LDB3O75112 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
LDB3O75112 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.28■□□□□ 0.68
LDB3O75112 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
LDB3O75112 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.28■□□□□ 0.68
LDB3O75112 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LDB3O75112 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.28■□□□□ 0.68
LDB3O75112 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.28■□□□□ 0.68
LDB3O75112 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.28■□□□□ 0.68
LDB3O75112 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.28■□□□□ 0.68
LDB3O75112 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.28■□□□□ 0.68
LDB3O75112 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.28■□□□□ 0.68
LDB3O75112 OR10C1-204ENST00000622521 1039 ntBASIC19.28■□□□□ 0.68
LDB3O75112 AC027702.1-201ENST00000563810 1770 ntBASIC19.28■□□□□ 0.68
LDB3O75112 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB3O75112 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LDB3O75112 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.27■□□□□ 0.68
LDB3O75112 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDB3O75112 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.27■□□□□ 0.68
LDB3O75112 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms