Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD2O60548 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
FOXD2O60548 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
FOXD2O60548 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXD2O60548 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXD2O60548 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXD2O60548 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 AC133561.5-201ENST00000635547 218 ntBASIC20.62■□□□□ 0.89
FOXD2O60548 AC097493.4-201ENST00000641197 219 ntBASIC20.62■□□□□ 0.89
FOXD2O60548 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
FOXD2O60548 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXD2O60548 KRT17P1-201ENST00000399211 1546 ntBASIC20.62■□□□□ 0.89
FOXD2O60548 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXD2O60548 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
FOXD2O60548 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.61■□□□□ 0.89
FOXD2O60548 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXD2O60548 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.61■□□□□ 0.89
FOXD2O60548 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXD2O60548 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXD2O60548 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXD2O60548 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.6■□□□□ 0.89
FOXD2O60548 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.6■□□□□ 0.89
FOXD2O60548 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD2O60548 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXD2O60548 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
FOXD2O60548 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXD2O60548 AC092667.1-201ENST00000434301 2586 ntBASIC20.6■□□□□ 0.89
FOXD2O60548 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXD2O60548 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FOXD2O60548 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD2O60548 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 POM121L13P-201ENST00000422362 380 ntBASIC20.59■□□□□ 0.89
FOXD2O60548 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXD2O60548 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
FOXD2O60548 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD2O60548 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXD2O60548 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
FOXD2O60548 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD2O60548 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
FOXD2O60548 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FOXD2O60548 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD2O60548 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
FOXD2O60548 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXD2O60548 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD2O60548 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD2O60548 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
FOXD2O60548 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD2O60548 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXD2O60548 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXD2O60548 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD2O60548 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
FOXD2O60548 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD2O60548 LINC01960-201ENST00000563759 1884 ntBASIC20.58■□□□□ 0.88
FOXD2O60548 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD2O60548 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms