Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHL1O00533 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CHL1O00533 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.53■■□□□ 1.84
CHL1O00533 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.53■■□□□ 1.84
CHL1O00533 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHL1O00533 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHL1O00533 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHL1O00533 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CHL1O00533 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.52■■□□□ 1.84
CHL1O00533 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.52■■□□□ 1.84
CHL1O00533 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHL1O00533 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.52■■□□□ 1.84
CHL1O00533 AC007375.3-201ENST00000600936 2314 ntBASIC26.52■■□□□ 1.84
CHL1O00533 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHL1O00533 AL356652.1-201ENST00000615962 565 ntBASIC26.52■■□□□ 1.84
CHL1O00533 MIR2861-201ENST00000636310 90 ntBASIC26.52■■□□□ 1.84
CHL1O00533 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHL1O00533 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHL1O00533 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHL1O00533 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.51■■□□□ 1.83
CHL1O00533 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.51■■□□□ 1.83
CHL1O00533 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
CHL1O00533 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.51■■□□□ 1.83
CHL1O00533 MIR4651-201ENST00000582622 73 ntBASIC26.51■■□□□ 1.83
CHL1O00533 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHL1O00533 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHL1O00533 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
CHL1O00533 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHL1O00533 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHL1O00533 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHL1O00533 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.5■■□□□ 1.83
CHL1O00533 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.5■■□□□ 1.83
CHL1O00533 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.5■■□□□ 1.83
CHL1O00533 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHL1O00533 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHL1O00533 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.5■■□□□ 1.83
CHL1O00533 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CHL1O00533 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.49■■□□□ 1.83
CHL1O00533 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.49■■□□□ 1.83
CHL1O00533 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.49■■□□□ 1.83
CHL1O00533 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CHL1O00533 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.49■■□□□ 1.83
CHL1O00533 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.49■■□□□ 1.83
CHL1O00533 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CHL1O00533 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHL1O00533 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
CHL1O00533 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 ABHD17AP1-201ENST00000358206 933 ntBASIC26.48■■□□□ 1.83
CHL1O00533 PGM5P4-201ENST00000421970 445 ntBASIC26.48■■□□□ 1.83
CHL1O00533 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHL1O00533 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CHL1O00533 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CHL1O00533 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CHL1O00533 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.47■■□□□ 1.83
CHL1O00533 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHL1O00533 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.47■■□□□ 1.83
CHL1O00533 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHL1O00533 C2orf69P4-201ENST00000565394 541 ntBASIC26.47■■□□□ 1.83
CHL1O00533 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.47■■□□□ 1.83
CHL1O00533 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHL1O00533 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CHL1O00533 KRT8P36-201ENST00000489121 1440 ntBASIC26.47■■□□□ 1.83
CHL1O00533 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CHL1O00533 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CHL1O00533 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.46■■□□□ 1.83
CHL1O00533 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.46■■□□□ 1.83
CHL1O00533 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 RNA5SP413-201ENST00000516373 109 ntBASIC26.46■■□□□ 1.83
CHL1O00533 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.46■■□□□ 1.83
CHL1O00533 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.46■■□□□ 1.83
CHL1O00533 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
CHL1O00533 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
CHL1O00533 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.46■■□□□ 1.83
CHL1O00533 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHL1O00533 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
CHL1O00533 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHL1O00533 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.45■■□□□ 1.82
CHL1O00533 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.45■■□□□ 1.82
CHL1O00533 TSPY20P-201ENST00000450910 630 ntBASIC26.45■■□□□ 1.82
CHL1O00533 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.45■■□□□ 1.82
CHL1O00533 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms