Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8-1A0A075B641 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.84□□□□□ -0.35
Trav8-1A0A075B641 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8-1A0A075B641 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms