Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HSPA8P16-201ENST00000454171 1865 ntBASIC9.65□□□□□ -0.86
SLC1A1P43005 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC9.65□□□□□ -0.86
SLC1A1P43005 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SLC1A1P43005 SPATA31E3P-201ENST00000613133 4214 ntBASIC9.65□□□□□ -0.86
SLC1A1P43005 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SLC1A1P43005 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC9.65□□□□□ -0.87
SLC1A1P43005 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SLC1A1P43005 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SLC1A1P43005 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SLC1A1P43005 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
SLC1A1P43005 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
SLC1A1P43005 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.65□□□□□ -0.87
SLC1A1P43005 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SLC1A1P43005 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
SLC1A1P43005 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC9.64□□□□□ -0.87
SLC1A1P43005 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
SLC1A1P43005 THADA-202ENST00000402360 2974 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC9.64□□□□□ -0.87
SLC1A1P43005 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AL139095.2-201ENST00000407940 730 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SLC1A1P43005 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 AC016738.2-203ENST00000433012 489 ntTSL 3 BASIC9.64□□□□□ -0.87
SLC1A1P43005 LLPHP2-201ENST00000436405 396 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC141930.1-201ENST00000438247 786 ntTSL 4 BASIC9.64□□□□□ -0.87
SLC1A1P43005 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC9.64□□□□□ -0.87
SLC1A1P43005 RN7SL38P-201ENST00000485238 296 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 RN7SL384P-201ENST00000490382 298 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 TPM3P9-202ENST00000492121 745 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC110768.2-201ENST00000506540 329 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC055753.1-201ENST00000510575 889 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC116359.1-201ENST00000510731 1099 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC9.64□□□□□ -0.87
SLC1A1P43005 GAPDHP60-201ENST00000513846 995 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AL049873.2-201ENST00000555790 498 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC124248.1-201ENST00000558221 402 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AC005829.1-202ENST00000562555 298 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AC113143.2-201ENST00000603849 394 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC091982.3-201ENST00000603996 1115 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 BNIP3P37-201ENST00000604107 901 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AL355376.2-202ENST00000604686 241 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC055822.1-201ENST00000606067 445 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AL356299.2-201ENST00000609218 586 ntTSL 4 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AC016747.3-201ENST00000609422 791 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 AC002094.4-201ENST00000613598 307 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AL008638.6-201ENST00000623947 4254 ntBASIC9.64□□□□□ -0.87
SLC1A1P43005 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC9.64□□□□□ -0.87
SLC1A1P43005 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC9.64□□□□□ -0.87
SLC1A1P43005 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC9.64□□□□□ -0.87
SLC1A1P43005 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC9.64□□□□□ -0.87
SLC1A1P43005 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SLC1A1P43005 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 EEF1A1P8-201ENST00000419025 1388 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
SLC1A1P43005 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 MORN3-201ENST00000355329 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 CABLES1-203ENST00000420687 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 C17orf80-206ENST00000577615 2049 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 BRD7P2-201ENST00000466133 1944 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SLC1A1P43005 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 MED15P4-201ENST00000417579 393 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 AL355001.1-201ENST00000422148 444 ntTSL 5 BASIC9.63□□□□□ -0.87
SLC1A1P43005 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 SLC2A1-AS1-202ENST00000431759 1124 ntTSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 LINC01501-203ENST00000449990 791 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 AL606490.6-201ENST00000453735 523 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 OR5BH1P-201ENST00000454101 919 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 AC010973.1-201ENST00000479085 511 ntTSL 4 BASIC9.63□□□□□ -0.87
SLC1A1P43005 RN7SL653P-201ENST00000494134 293 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 LINC02213-201ENST00000504650 518 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AC009800.1-201ENST00000511357 1006 ntBASIC9.63□□□□□ -0.87
SLC1A1P43005 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 EVX1-AS-201ENST00000517726 480 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AC104232.1-201ENST00000522106 875 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms