Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 YBX1P1-201ENST00000445822 960 ntBASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDD3Q9Y3P4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 AC061975.6-201ENST00000579045 1553 ntBASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDD3Q9Y3P4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDD3Q9Y3P4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 TERF1P2-201ENST00000583350 1212 ntBASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RHBDD3Q9Y3P4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 CCDC92B-201ENST00000575506 885 ntBASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 AP004607.4-201ENST00000530158 1459 ntBASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDD3Q9Y3P4 AC121338.2-201ENST00000622535 1744 ntBASIC17.92■□□□□ 0.46
RHBDD3Q9Y3P4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.92■□□□□ 0.46
RHBDD3Q9Y3P4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDD3Q9Y3P4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms