Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
LEMD3Q9Y2U8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LEMD3Q9Y2U8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LEMD3Q9Y2U8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 AL356652.1-201ENST00000615962 565 ntBASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.1■■□□□ 1.61
LEMD3Q9Y2U8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LEMD3Q9Y2U8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 MIR718-201ENST00000390190 70 ntBASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.08■■□□□ 1.61
LEMD3Q9Y2U8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.08■■□□□ 1.6
LEMD3Q9Y2U8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 AC005829.2-201ENST00000571422 1056 ntBASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.07■■□□□ 1.6
LEMD3Q9Y2U8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LEMD3Q9Y2U8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms