Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN3Q9NQS3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 RARRES2P11-201ENST00000635158 484 ntBASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 AC073111.5-205ENST00000641717 521 ntBASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 KRT16P2-201ENST00000414673 1423 ntBASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN3Q9NQS3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 CDCA4P2-201ENST00000441182 718 ntBASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 DUX4L16-201ENST00000555130 1264 ntBASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 AC010536.3-201ENST00000620306 533 ntBASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN3Q9NQS3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NECTIN3Q9NQS3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN3Q9NQS3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.64■□□□□ 0.73
NECTIN3Q9NQS3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.64■□□□□ 0.73
NECTIN3Q9NQS3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.64■□□□□ 0.73
NECTIN3Q9NQS3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN3Q9NQS3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN3Q9NQS3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 Z98882.1-201ENST00000622160 2253 ntBASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 AC090192.1-201ENST00000517740 490 ntBASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 RAP2CP1-201ENST00000605103 478 ntBASIC19.62■□□□□ 0.73
NECTIN3Q9NQS3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms