Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC013268.1-206ENST00000638368 961 ntBASIC19.05■□□□□ 0.64
UBQLN3Q9H347 AC112229.1-201ENST00000639295 961 ntBASIC19.05■□□□□ 0.64
UBQLN3Q9H347 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.04■□□□□ 0.64
UBQLN3Q9H347 AC007322.4-201ENST00000509611 723 ntBASIC19.04■□□□□ 0.64
UBQLN3Q9H347 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 AL050303.2-201ENST00000619798 666 ntBASIC19.04■□□□□ 0.64
UBQLN3Q9H347 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN3Q9H347 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 LINC01006-201ENST00000333319 2292 ntBASIC19.03■□□□□ 0.64
UBQLN3Q9H347 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 NCF1B-203ENST00000435988 1254 ntBASIC19.03■□□□□ 0.64
UBQLN3Q9H347 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.03■□□□□ 0.64
UBQLN3Q9H347 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN3Q9H347 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 FEM1AP1-201ENST00000431297 1995 ntBASIC19.02■□□□□ 0.64
UBQLN3Q9H347 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 RBM17P2-201ENST00000616397 1405 ntBASIC19.02■□□□□ 0.64
UBQLN3Q9H347 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 AC005181.1-201ENST00000604782 1256 ntBASIC19.02■□□□□ 0.64
UBQLN3Q9H347 AC243732.1-201ENST00000612648 864 ntBASIC19.02■□□□□ 0.64
UBQLN3Q9H347 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN3Q9H347 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBQLN3Q9H347 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
UBQLN3Q9H347 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBQLN3Q9H347 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.02■□□□□ 0.63
UBQLN3Q9H347 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 HLA-L-209ENST00000420110 1011 ntBASIC19.01■□□□□ 0.63
UBQLN3Q9H347 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms