Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SDF4Q9BRK5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 POU5F1P4-201ENST00000413175 1085 ntBASIC23.83■■□□□ 1.41
SDF4Q9BRK5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 SLC7A5P2-201ENST00000553010 536 ntBASIC23.83■■□□□ 1.41
SDF4Q9BRK5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SDF4Q9BRK5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
SDF4Q9BRK5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SDF4Q9BRK5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SDF4Q9BRK5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SDF4Q9BRK5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.83■■□□□ 1.4
SDF4Q9BRK5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 DUX4L16-201ENST00000555130 1264 ntBASIC23.82■■□□□ 1.4
SDF4Q9BRK5 SLC7A5P1-201ENST00000568957 537 ntBASIC23.82■■□□□ 1.4
SDF4Q9BRK5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 AC231657.2-201ENST00000624556 255 ntBASIC23.82■■□□□ 1.4
SDF4Q9BRK5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SDF4Q9BRK5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 LINC01006-201ENST00000333319 2292 ntBASIC23.81■■□□□ 1.4
SDF4Q9BRK5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 ID1-201ENST00000376105 1233 ntBASIC23.81■■□□□ 1.4
SDF4Q9BRK5 AC006970.2-201ENST00000450065 779 ntBASIC23.81■■□□□ 1.4
SDF4Q9BRK5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.81■■□□□ 1.4
SDF4Q9BRK5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 AC010536.3-201ENST00000620306 533 ntBASIC23.8■■□□□ 1.4
SDF4Q9BRK5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
SDF4Q9BRK5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 CROCCP5-201ENST00000436658 830 ntBASIC23.79■■□□□ 1.4
SDF4Q9BRK5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDF4Q9BRK5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SDF4Q9BRK5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.78■■□□□ 1.4
SDF4Q9BRK5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SDF4Q9BRK5 AC007322.1-201ENST00000426983 750 ntBASIC23.78■■□□□ 1.4
SDF4Q9BRK5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SDF4Q9BRK5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
SDF4Q9BRK5 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.78■■□□□ 1.4
SDF4Q9BRK5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.78■■□□□ 1.4
SDF4Q9BRK5 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.78■■□□□ 1.4
SDF4Q9BRK5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms