Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDCA3Q99618 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA3Q99618 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA3Q99618 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CDCA3Q99618 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA3Q99618 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.61■■□□□ 1.05
CDCA3Q99618 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDCA3Q99618 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA3Q99618 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA3Q99618 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA3Q99618 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA3Q99618 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA3Q99618 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.6■■□□□ 1.05
CDCA3Q99618 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA3Q99618 AL355075.4-201ENST00000554988 638 ntBASIC21.6■■□□□ 1.05
CDCA3Q99618 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA3Q99618 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA3Q99618 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.6■■□□□ 1.05
CDCA3Q99618 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDCA3Q99618 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA3Q99618 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA3Q99618 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CDCA3Q99618 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDCA3Q99618 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.59■■□□□ 1.05
CDCA3Q99618 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.59■■□□□ 1.05
CDCA3Q99618 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDCA3Q99618 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.59■■□□□ 1.05
CDCA3Q99618 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA3Q99618 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.59■■□□□ 1.05
CDCA3Q99618 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CDCA3Q99618 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.59■■□□□ 1.05
CDCA3Q99618 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDCA3Q99618 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.58■■□□□ 1.05
CDCA3Q99618 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.58■■□□□ 1.05
CDCA3Q99618 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CDCA3Q99618 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA3Q99618 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA3Q99618 FAM99A-202ENST00000538190 1989 ntBASIC21.58■■□□□ 1.05
CDCA3Q99618 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDCA3Q99618 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CDCA3Q99618 RCN1P1-201ENST00000400413 996 ntBASIC21.58■■□□□ 1.05
CDCA3Q99618 TSPY15P-201ENST00000457163 923 ntBASIC21.58■■□□□ 1.05
CDCA3Q99618 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.58■■□□□ 1.05
CDCA3Q99618 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.58■■□□□ 1.05
CDCA3Q99618 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDCA3Q99618 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDCA3Q99618 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDCA3Q99618 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.58■■□□□ 1.04
CDCA3Q99618 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.57■■□□□ 1.04
CDCA3Q99618 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDCA3Q99618 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.57■■□□□ 1.04
CDCA3Q99618 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.57■■□□□ 1.04
CDCA3Q99618 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDCA3Q99618 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDCA3Q99618 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDCA3Q99618 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDCA3Q99618 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDCA3Q99618 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDCA3Q99618 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDCA3Q99618 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDCA3Q99618 AL356652.1-201ENST00000615962 565 ntBASIC21.56■■□□□ 1.04
CDCA3Q99618 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.56■■□□□ 1.04
CDCA3Q99618 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDCA3Q99618 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDCA3Q99618 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDCA3Q99618 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.55■■□□□ 1.04
CDCA3Q99618 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.55■■□□□ 1.04
CDCA3Q99618 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.55■■□□□ 1.04
CDCA3Q99618 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDCA3Q99618 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.55■■□□□ 1.04
CDCA3Q99618 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDCA3Q99618 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDCA3Q99618 AC080038.3-201ENST00000623346 1952 ntBASIC21.55■■□□□ 1.04
CDCA3Q99618 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.55■■□□□ 1.04
CDCA3Q99618 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms