Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 AL162377.1-201ENST00000618844 1793 ntBASIC19.73■□□□□ 0.75
VPS33AQ96AX1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.73■□□□□ 0.75
VPS33AQ96AX1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VPS33AQ96AX1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS33AQ96AX1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 AC061975.6-201ENST00000579045 1553 ntBASIC19.71■□□□□ 0.75
VPS33AQ96AX1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 AC011484.1-201ENST00000377652 1995 ntBASIC19.71■□□□□ 0.75
VPS33AQ96AX1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS33AQ96AX1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.71■□□□□ 0.74
VPS33AQ96AX1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS33AQ96AX1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 AC099778.1-201ENST00000568593 1911 ntBASIC19.69■□□□□ 0.74
VPS33AQ96AX1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS33AQ96AX1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS33AQ96AX1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms