Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
KLHDC1Q8N7A1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC1Q8N7A1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC1Q8N7A1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 AC133552.2-202ENST00000575694 574 ntBASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHDC1Q8N7A1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.58■□□□□ 0.25
KLHDC1Q8N7A1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
KLHDC1Q8N7A1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHDC1Q8N7A1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHDC1Q8N7A1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 POU5F1P4-201ENST00000413175 1085 ntBASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 AC069152.1-201ENST00000438030 544 ntBASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 KRT18P6-201ENST00000555540 1265 ntBASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHDC1Q8N7A1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 AC068338.2-201ENST00000563278 1430 ntBASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 AC007322.4-201ENST00000509611 723 ntBASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 AC008694.1-202ENST00000636953 945 ntBASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 AC133041.1-202ENST00000642053 222 ntBASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHDC1Q8N7A1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms