Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TUBA1AQ71U36 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TUBA1AQ71U36 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 RARRES2P6-201ENST00000567333 442 ntBASIC18.89■□□□□ 0.61
TUBA1AQ71U36 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TUBA1AQ71U36 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 SMG8-203ENST00000578922 2178 ntBASIC18.88■□□□□ 0.61
TUBA1AQ71U36 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1AQ71U36 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 AC018445.3-201ENST00000624177 1945 ntBASIC18.87■□□□□ 0.61
TUBA1AQ71U36 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1AQ71U36 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA1AQ71U36 AC006128.1-201ENST00000624704 1661 ntBASIC18.85■□□□□ 0.61
TUBA1AQ71U36 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms