Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFPL4BQ6ZWI9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 MIR935-201ENST00000401179 91 ntBASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFPL4BQ6ZWI9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL4BQ6ZWI9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 AC034268.1-201ENST00000441047 882 ntBASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 AC244015.2-201ENST00000616358 1861 ntBASIC18.29■□□□□ 0.52
RFPL4BQ6ZWI9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL4BQ6ZWI9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 AC004854.2-201ENST00000608450 1441 ntBASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 EEF1DP3-203ENST00000566025 782 ntBASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 KRT18P61-201ENST00000585825 1298 ntBASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.27■□□□□ 0.52
RFPL4BQ6ZWI9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFPL4BQ6ZWI9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms