Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 VMA21YGR105W 234 nt2.46□□□□□ -2.02
DNL4Q08387 SRP21YKL122C 504 nt2.46□□□□□ -2.02
DNL4Q08387 CSI2YOL007C 1026 nt2.46□□□□□ -2.02
DNL4Q08387 CSM4YPL200W 471 nt2.46□□□□□ -2.02
DNL4Q08387 RPL11AYPR102C 525 nt2.46□□□□□ -2.02
DNL4Q08387 POM152YMR129W 4014 nt2.46□□□□□ -2.02
DNL4Q08387 SHE9YDR393W 1371 nt2.46□□□□□ -2.02
DNL4Q08387 BNR1YIL159W 4128 nt2.46□□□□□ -2.02
DNL4Q08387 PSD2YGR170W 3417 nt2.46□□□□□ -2.02
DNL4Q08387 SUL1YBR294W 2580 nt2.46□□□□□ -2.02
DNL4Q08387 PUT3YKL015W 2940 nt2.45□□□□□ -2.02
DNL4Q08387 SRB4YER022W 2064 nt2.45□□□□□ -2.02
DNL4Q08387 SNA4YDL123W 423 nt2.45□□□□□ -2.02
DNL4Q08387 YIL068W-AYIL068W-A 384 nt2.45□□□□□ -2.02
DNL4Q08387 YIR020C-BYIR020C-B 735 nt2.45□□□□□ -2.02
DNL4Q08387 YJL119CYJL119C 324 nt2.45□□□□□ -2.02
DNL4Q08387 STE18YJR086W 333 nt2.45□□□□□ -2.02
DNL4Q08387 YLR456WYLR456W 615 nt2.45□□□□□ -2.02
DNL4Q08387 MBA1YBR185C 837 nt2.45□□□□□ -2.02
DNL4Q08387 ASI3YNL008C 2031 nt2.45□□□□□ -2.02
DNL4Q08387 GCV2YMR189W 3105 nt2.45□□□□□ -2.02
DNL4Q08387 TRM2YKR056W 1920 nt2.44□□□□□ -2.02
DNL4Q08387 GUP1YGL084C 1683 nt2.44□□□□□ -2.02
DNL4Q08387 NCB2YDR397C 441 nt2.44□□□□□ -2.02
DNL4Q08387 RPL27BYDR471W 411 nt2.44□□□□□ -2.02
DNL4Q08387 SLX9YGR081C 633 nt2.44□□□□□ -2.02
DNL4Q08387 SDL1YIL167W 633 nt2.44□□□□□ -2.02
DNL4Q08387 RBL2YOR265W 321 nt2.44□□□□□ -2.02
DNL4Q08387 MEI5YPL121C 669 nt2.44□□□□□ -2.02
DNL4Q08387 SEC66YBR171W 621 nt2.44□□□□□ -2.02
DNL4Q08387 YKL075CYKL075C 1353 nt2.44□□□□□ -2.02
DNL4Q08387 YJL181WYJL181W 1836 nt2.43□□□□□ -2.02
DNL4Q08387 ATG11YPR049C 3537 nt2.43□□□□□ -2.02
DNL4Q08387 MRP10YDL045W-A 288 nt2.43□□□□□ -2.02
DNL4Q08387 CAJ1YER048C 1176 nt2.43□□□□□ -2.02
DNL4Q08387 TDA2YER071C 381 nt2.43□□□□□ -2.02
DNL4Q08387 PCL5YHR071W 690 nt2.43□□□□□ -2.02
DNL4Q08387 YIL012WYIL012W 342 nt2.43□□□□□ -2.02
DNL4Q08387 ATP7YKL016C 525 nt2.43□□□□□ -2.02
DNL4Q08387 YKL023C-AYKL023C-A 228 nt2.43□□□□□ -2.02
DNL4Q08387 YKR051WYKR051W 1257 nt2.43□□□□□ -2.02
DNL4Q08387 BET3YKR068C 582 nt2.43□□□□□ -2.02
DNL4Q08387 CWC24YLR323C 780 nt2.43□□□□□ -2.02
DNL4Q08387 RCN2YOR220W 798 nt2.43□□□□□ -2.02
DNL4Q08387 DAD3YBR233W-A 285 nt2.43□□□□□ -2.02
DNL4Q08387 TPS2YDR074W 2691 nt2.43□□□□□ -2.02
DNL4Q08387 MAL33YBR297W 1407 nt2.42□□□□□ -2.02
DNL4Q08387 15S_rRNA15S_rRNA 1649 nt2.42□□□□□ -2.02
DNL4Q08387 TOF1YNL273W 3717 nt2.42□□□□□ -2.02
DNL4Q08387 YDR115WYDR115W 318 nt2.42□□□□□ -2.02
DNL4Q08387 YER091C-AYER091C-A 222 nt2.42□□□□□ -2.02
DNL4Q08387 MPO1YGL010W 525 nt2.42□□□□□ -2.02
DNL4Q08387 NOP19YGR251W 591 nt2.42□□□□□ -2.02
DNL4Q08387 PRS3YHL011C 963 nt2.42□□□□□ -2.02
DNL4Q08387 RPS16AYMR143W 432 nt2.42□□□□□ -2.02
DNL4Q08387 COQ10YOL008W 624 nt2.42□□□□□ -2.02
DNL4Q08387 RPL25YOL127W 429 nt2.42□□□□□ -2.02
DNL4Q08387 snR191snR191 274 nt2.42□□□□□ -2.02
DNL4Q08387 SAP190YKR028W 3102 nt2.42□□□□□ -2.02
DNL4Q08387 RLI1YDR091C 1827 nt2.42□□□□□ -2.02
DNL4Q08387 FAR11YNL127W 2862 nt2.42□□□□□ -2.02
DNL4Q08387 APC2YLR127C 2562 nt2.42□□□□□ -2.02
DNL4Q08387 INP53YOR109W 3324 nt2.42□□□□□ -2.02
DNL4Q08387 DNF1YER166W 4716 nt2.42□□□□□ -2.02
DNL4Q08387 snR84snR84 550 nt2.41□□□□□ -2.02
DNL4Q08387 SAS2YMR127C 1017 nt2.41□□□□□ -2.02
DNL4Q08387 RPL16BYNL069C 597 nt2.41□□□□□ -2.02
DNL4Q08387 YBT1YLL048C 4986 nt2.41□□□□□ -2.02
DNL4Q08387 SSQ1YLR369W 1974 nt2.41□□□□□ -2.02
DNL4Q08387 SNX41YDR425W 1878 nt2.41□□□□□ -2.02
DNL4Q08387 NEL1YHR035W 1893 nt2.4□□□□□ -2.03
DNL4Q08387 YDL016CYDL016C 303 nt2.4□□□□□ -2.03
DNL4Q08387 MIC19YFR011C 513 nt2.4□□□□□ -2.03
DNL4Q08387 RPS29AYLR388W 171 nt2.4□□□□□ -2.03
DNL4Q08387 RPS1AYLR441C 768 nt2.4□□□□□ -2.03
DNL4Q08387 ATP18YML081C-A 180 nt2.4□□□□□ -2.03
DNL4Q08387 DGK1YOR311C 873 nt2.4□□□□□ -2.03
DNL4Q08387 YBR051WYBR051W 351 nt2.4□□□□□ -2.03
DNL4Q08387 TRS20YBR254C 528 nt2.4□□□□□ -2.03
DNL4Q08387 YCL023CYCL023C 348 nt2.4□□□□□ -2.03
DNL4Q08387 YEL1YBL060W 2064 nt2.39□□□□□ -2.03
DNL4Q08387 FAR7YFR008W 666 nt2.39□□□□□ -2.03
DNL4Q08387 YGR290WYGR290W 444 nt2.39□□□□□ -2.03
DNL4Q08387 GIC1YHR061C 945 nt2.39□□□□□ -2.03
DNL4Q08387 YJR141WYJR141W 1044 nt2.39□□□□□ -2.03
DNL4Q08387 YKL165C-AYKL165C-A 234 nt2.39□□□□□ -2.03
DNL4Q08387 NYV1YLR093C 762 nt2.39□□□□□ -2.03
DNL4Q08387 VPS63YLR261C 327 nt2.39□□□□□ -2.03
DNL4Q08387 YOL134CYOL134C 390 nt2.39□□□□□ -2.03
DNL4Q08387 GAL7YBR018C 1101 nt2.39□□□□□ -2.03
DNL4Q08387 YBR209WYBR209W 318 nt2.39□□□□□ -2.03
DNL4Q08387 RPS24AYER074W 408 nt2.38□□□□□ -2.03
DNL4Q08387 YMR31YFR049W 372 nt2.38□□□□□ -2.03
DNL4Q08387 YGR228WYGR228W 345 nt2.38□□□□□ -2.03
DNL4Q08387 YLR154W-EYLR154W-E 204 nt2.38□□□□□ -2.03
DNL4Q08387 PDP3YLR455W 915 nt2.38□□□□□ -2.03
DNL4Q08387 AIM32YML050W 936 nt2.38□□□□□ -2.03
DNL4Q08387 UBX4YMR067C 1251 nt2.38□□□□□ -2.03
DNL4Q08387 FPR1YNL135C 345 nt2.38□□□□□ -2.03
DNL4Q08387 YNL150WYNL150W 408 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 77.6 ms