Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX6-1P78426 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX6-1P78426 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX6-1P78426 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.06■□□□□ 0.48
NKX6-1P78426 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX6-1P78426 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX6-1P78426 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX6-1P78426 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX6-1P78426 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX6-1P78426 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX6-1P78426 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX6-1P78426 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NKX6-1P78426 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.05■□□□□ 0.48
NKX6-1P78426 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 RNF165-205ENST00000588679 2904 ntBASIC18.05■□□□□ 0.48
NKX6-1P78426 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NKX6-1P78426 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX6-1P78426 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 RARRES2P4-201ENST00000514074 484 ntBASIC18.05■□□□□ 0.48
NKX6-1P78426 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 AC069236.1-201ENST00000604339 616 ntBASIC18.05■□□□□ 0.48
NKX6-1P78426 AC092118.2-201ENST00000613495 667 ntBASIC18.05■□□□□ 0.48
NKX6-1P78426 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.05■□□□□ 0.48
NKX6-1P78426 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NKX6-1P78426 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX6-1P78426 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NKX6-1P78426 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NKX6-1P78426 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NKX6-1P78426 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX6-1P78426 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NKX6-1P78426 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NKX6-1P78426 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-1P78426 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
NKX6-1P78426 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NKX6-1P78426 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.04■□□□□ 0.48
NKX6-1P78426 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX6-1P78426 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NKX6-1P78426 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX6-1P78426 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX6-1P78426 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.04■□□□□ 0.48
NKX6-1P78426 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.04■□□□□ 0.48
NKX6-1P78426 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-1P78426 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX6-1P78426 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
NKX6-1P78426 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NKX6-1P78426 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 ESRRAP1-201ENST00000400596 1257 ntBASIC18.03■□□□□ 0.48
NKX6-1P78426 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
NKX6-1P78426 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.03■□□□□ 0.48
NKX6-1P78426 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.03■□□□□ 0.48
NKX6-1P78426 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.03■□□□□ 0.48
NKX6-1P78426 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NKX6-1P78426 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-1P78426 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-1P78426 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.02■□□□□ 0.48
NKX6-1P78426 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NKX6-1P78426 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NKX6-1P78426 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-1P78426 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-1P78426 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms