Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.92■□□□□ 0.46
SEC61A1P61619 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.92■□□□□ 0.46
SEC61A1P61619 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.92■□□□□ 0.46
SEC61A1P61619 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SEC61A1P61619 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SEC61A1P61619 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.92■□□□□ 0.46
SEC61A1P61619 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.91■□□□□ 0.46
SEC61A1P61619 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SEC61A1P61619 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.91■□□□□ 0.46
SEC61A1P61619 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SEC61A1P61619 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.91■□□□□ 0.46
SEC61A1P61619 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.91■□□□□ 0.46
SEC61A1P61619 AC092437.1-201ENST00000624794 1048 ntBASIC17.91■□□□□ 0.46
SEC61A1P61619 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.91■□□□□ 0.46
SEC61A1P61619 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.91■□□□□ 0.46
SEC61A1P61619 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.91■□□□□ 0.46
SEC61A1P61619 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61A1P61619 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SEC61A1P61619 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 AC004854.2-201ENST00000608450 1441 ntBASIC17.9■□□□□ 0.46
SEC61A1P61619 AC005224.4-201ENST00000583262 1652 ntBASIC17.9■□□□□ 0.46
SEC61A1P61619 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.9■□□□□ 0.46
SEC61A1P61619 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 AC087289.5-201ENST00000586076 3175 ntBASIC17.9■□□□□ 0.46
SEC61A1P61619 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.9■□□□□ 0.46
SEC61A1P61619 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SEC61A1P61619 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SEC61A1P61619 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.9■□□□□ 0.46
SEC61A1P61619 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SEC61A1P61619 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.9■□□□□ 0.46
SEC61A1P61619 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.9■□□□□ 0.46
SEC61A1P61619 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.9■□□□□ 0.46
SEC61A1P61619 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.9■□□□□ 0.46
SEC61A1P61619 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEC61A1P61619 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.9■□□□□ 0.46
SEC61A1P61619 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SEC61A1P61619 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SEC61A1P61619 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.89■□□□□ 0.45
SEC61A1P61619 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.89■□□□□ 0.45
SEC61A1P61619 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
SEC61A1P61619 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.89■□□□□ 0.45
SEC61A1P61619 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.89■□□□□ 0.45
SEC61A1P61619 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SEC61A1P61619 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 AC026471.6-201ENST00000622954 1905 ntBASIC17.89■□□□□ 0.45
SEC61A1P61619 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.89■□□□□ 0.45
SEC61A1P61619 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.89■□□□□ 0.45
SEC61A1P61619 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEC61A1P61619 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.88■□□□□ 0.45
SEC61A1P61619 AP004607.4-201ENST00000530158 1459 ntBASIC17.88■□□□□ 0.45
SEC61A1P61619 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.88■□□□□ 0.45
SEC61A1P61619 AP004607.7-201ENST00000527152 1677 ntBASIC17.88■□□□□ 0.45
SEC61A1P61619 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SEC61A1P61619 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.88■□□□□ 0.45
SEC61A1P61619 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.88■□□□□ 0.45
SEC61A1P61619 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.88■□□□□ 0.45
SEC61A1P61619 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.88■□□□□ 0.45
SEC61A1P61619 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
SEC61A1P61619 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.88■□□□□ 0.45
SEC61A1P61619 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.88■□□□□ 0.45
SEC61A1P61619 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61A1P61619 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.87■□□□□ 0.45
SEC61A1P61619 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms