Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.41■□□□□ 0.86
LIMK1P53667 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.41■□□□□ 0.86
LIMK1P53667 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LIMK1P53667 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
LIMK1P53667 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LIMK1P53667 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.4■□□□□ 0.86
LIMK1P53667 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LIMK1P53667 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LIMK1P53667 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.4■□□□□ 0.86
LIMK1P53667 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.4■□□□□ 0.86
LIMK1P53667 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK1P53667 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LIMK1P53667 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
LIMK1P53667 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LIMK1P53667 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LIMK1P53667 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LIMK1P53667 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.39■□□□□ 0.85
LIMK1P53667 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.39■□□□□ 0.85
LIMK1P53667 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK1P53667 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK1P53667 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LIMK1P53667 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK1P53667 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LIMK1P53667 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LIMK1P53667 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK1P53667 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK1P53667 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.39■□□□□ 0.85
LIMK1P53667 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK1P53667 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK1P53667 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK1P53667 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK1P53667 ARMC10P1-201ENST00000313754 855 ntBASIC20.38■□□□□ 0.85
LIMK1P53667 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK1P53667 AC091799.1-201ENST00000422823 811 ntBASIC20.38■□□□□ 0.85
LIMK1P53667 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.38■□□□□ 0.85
LIMK1P53667 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK1P53667 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.38■□□□□ 0.85
LIMK1P53667 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
LIMK1P53667 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.37■□□□□ 0.85
LIMK1P53667 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.37■□□□□ 0.85
LIMK1P53667 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LIMK1P53667 AC124016.1-201ENST00000609552 612 ntBASIC20.37■□□□□ 0.85
LIMK1P53667 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 AL590326.2-201ENST00000625139 305 ntBASIC20.37■□□□□ 0.85
LIMK1P53667 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.37■□□□□ 0.85
LIMK1P53667 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
LIMK1P53667 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIMK1P53667 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LIMK1P53667 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.36■□□□□ 0.85
LIMK1P53667 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.36■□□□□ 0.85
LIMK1P53667 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LIMK1P53667 KRT18P68-201ENST00000392293 1000 ntBASIC20.36■□□□□ 0.85
LIMK1P53667 TSPY15P-201ENST00000457163 923 ntBASIC20.36■□□□□ 0.85
LIMK1P53667 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LIMK1P53667 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LIMK1P53667 MTDHP1-201ENST00000605323 784 ntBASIC20.36■□□□□ 0.85
LIMK1P53667 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LIMK1P53667 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LIMK1P53667 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LIMK1P53667 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.36■□□□□ 0.85
LIMK1P53667 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LIMK1P53667 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.35■□□□□ 0.85
LIMK1P53667 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.35■□□□□ 0.85
LIMK1P53667 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.35■□□□□ 0.85
LIMK1P53667 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
LIMK1P53667 AC113410.3-201ENST00000623366 203 ntBASIC20.35■□□□□ 0.85
LIMK1P53667 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.35■□□□□ 0.85
LIMK1P53667 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms