Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 SLN1YIL147C 3663 nt2.69□□□□□ -1.98
RPH1P39956 MUD2YKL074C 1584 nt2.69□□□□□ -1.98
RPH1P39956 MMS1YPR164W 4224 nt2.68□□□□□ -1.98
RPH1P39956 HOP1YIL072W 1818 nt2.68□□□□□ -1.98
RPH1P39956 RIF1YBR275C 5751 nt2.68□□□□□ -1.98
RPH1P39956 ESL2YKR096W 3588 nt2.68□□□□□ -1.98
RPH1P39956 MAK5YBR142W 2322 nt2.68□□□□□ -1.98
RPH1P39956 YCR090CYCR090C 549 nt2.68□□□□□ -1.98
RPH1P39956 YAP6YDR259C 1152 nt2.68□□□□□ -1.98
RPH1P39956 ECL1YGR146C 636 nt2.68□□□□□ -1.98
RPH1P39956 YHL046W-AYHL046W-A 327 nt2.68□□□□□ -1.98
RPH1P39956 MCR1YKL150W 909 nt2.68□□□□□ -1.98
RPH1P39956 AIM29YKR074W 468 nt2.68□□□□□ -1.98
RPH1P39956 YMR001C-AYMR001C-A 231 nt2.68□□□□□ -1.98
RPH1P39956 MOT1YPL082C 5604 nt2.68□□□□□ -1.98
RPH1P39956 IKI3YLR384C 4050 nt2.68□□□□□ -1.98
RPH1P39956 BI4Q0120 1917 nt2.68□□□□□ -1.98
RPH1P39956 DIA2YOR080W 2199 nt2.67□□□□□ -1.98
RPH1P39956 GDI1YER136W 1356 nt2.67□□□□□ -1.98
RPH1P39956 YJL169WYJL169W 369 nt2.67□□□□□ -1.98
RPH1P39956 YMR153C-AYMR153C-A 336 nt2.67□□□□□ -1.98
RPH1P39956 RPL20AYMR242C 519 nt2.67□□□□□ -1.98
RPH1P39956 YEL1YBL060W 2064 nt2.67□□□□□ -1.98
RPH1P39956 SEC7YDR170C 6030 nt2.67□□□□□ -1.98
RPH1P39956 TOM1YDR457W 9807 nt2.66□□□□□ -1.98
RPH1P39956 SEC26YDR238C 2922 nt2.66□□□□□ -1.98
RPH1P39956 RIX1YHR197W 2292 nt2.66□□□□□ -1.98
RPH1P39956 SRB4YER022W 2064 nt2.66□□□□□ -1.98
RPH1P39956 SKT5YBL061C 2091 nt2.66□□□□□ -1.98
RPH1P39956 YGR242WYGR242W 309 nt2.66□□□□□ -1.98
RPH1P39956 DFG10YIL049W 762 nt2.66□□□□□ -1.98
RPH1P39956 VPH2YKL119C 648 nt2.66□□□□□ -1.98
RPH1P39956 RIO2YNL207W 1278 nt2.66□□□□□ -1.98
RPH1P39956 VID24YBR105C 1089 nt2.66□□□□□ -1.98
RPH1P39956 YKR078WYKR078W 1758 nt2.66□□□□□ -1.98
RPH1P39956 RPO41YFL036W 4056 nt2.66□□□□□ -1.98
RPH1P39956 DSE4YNR067C 3354 nt2.65□□□□□ -1.98
RPH1P39956 IES5YER092W 378 nt2.65□□□□□ -1.99
RPH1P39956 YML108WYML108W 318 nt2.65□□□□□ -1.99
RPH1P39956 HFM1YGL251C 3564 nt2.65□□□□□ -1.99
RPH1P39956 YGL042CYGL042C 306 nt2.64□□□□□ -1.99
RPH1P39956 YKL068W-AYKL068W-A 237 nt2.64□□□□□ -1.99
RPH1P39956 SRL3YKR091W 741 nt2.64□□□□□ -1.99
RPH1P39956 HRI1YLR301W 735 nt2.64□□□□□ -1.99
RPH1P39956 JIP3YLR331C 378 nt2.64□□□□□ -1.99
RPH1P39956 TIF11YMR260C 462 nt2.64□□□□□ -1.99
RPH1P39956 YOL085W-AYOL085W-A 213 nt2.64□□□□□ -1.99
RPH1P39956 PFY1YOR122C 381 nt2.64□□□□□ -1.99
RPH1P39956 YPL276WYPL276W 438 nt2.64□□□□□ -1.99
RPH1P39956 YBR076C-AYBR076C-A 267 nt2.64□□□□□ -1.99
RPH1P39956 MSS18YPR134W 807 nt2.64□□□□□ -1.99
RPH1P39956 RTT10YPL183C 3042 nt2.64□□□□□ -1.99
RPH1P39956 MET5YJR137C 4329 nt2.64□□□□□ -1.99
RPH1P39956 SLP1YOR154W 1764 nt2.64□□□□□ -1.99
RPH1P39956 YCG1YDR325W 3108 nt2.64□□□□□ -1.99
RPH1P39956 GIN4YDR507C 3429 nt2.64□□□□□ -1.99
RPH1P39956 SSF2YDR312W 1362 nt2.63□□□□□ -1.99
RPH1P39956 PPN1YDR452W 2025 nt2.63□□□□□ -1.99
RPH1P39956 SSP1YHR184W 1716 nt2.63□□□□□ -1.99
RPH1P39956 MED1YPR070W 1701 nt2.63□□□□□ -1.99
RPH1P39956 RPB9YGL070C 369 nt2.63□□□□□ -1.99
RPH1P39956 BIG1YHR101C 1008 nt2.63□□□□□ -1.99
RPH1P39956 YNL146C-AYNL146C-A 195 nt2.63□□□□□ -1.99
RPH1P39956 YOR293C-AYOR293C-A 150 nt2.63□□□□□ -1.99
RPH1P39956 snR54snR54 86 nt2.63□□□□□ -1.99
RPH1P39956 NET1YJL076W 3570 nt2.63□□□□□ -1.99
RPH1P39956 PDR3YBL005W 2931 nt2.63□□□□□ -1.99
RPH1P39956 GYL1YMR192W 2163 nt2.63□□□□□ -1.99
RPH1P39956 HAA1YPR008W 2085 nt2.62□□□□□ -1.99
RPH1P39956 PTP3YER075C 2787 nt2.62□□□□□ -1.99
RPH1P39956 SLH1YGR271W 5904 nt2.62□□□□□ -1.99
RPH1P39956 YCK2YNL154C 1641 nt2.62□□□□□ -1.99
RPH1P39956 YCR064CYCR064C 411 nt2.62□□□□□ -1.99
RPH1P39956 snR70snR70 164 nt2.62□□□□□ -1.99
RPH1P39956 ERV1YGR029W 570 nt2.62□□□□□ -1.99
RPH1P39956 RTS3YGR161C 792 nt2.62□□□□□ -1.99
RPH1P39956 OTU2YHL013C 924 nt2.62□□□□□ -1.99
RPH1P39956 tW(CCA)G1tW(CCA)G1 72 nt2.62□□□□□ -1.99
RPH1P39956 tW(CCA)G2tW(CCA)G2 72 nt2.62□□□□□ -1.99
RPH1P39956 tW(CCA)JtW(CCA)J 72 nt2.62□□□□□ -1.99
RPH1P39956 tW(CCA)KtW(CCA)K 72 nt2.62□□□□□ -1.99
RPH1P39956 tW(CCA)MtW(CCA)M 72 nt2.62□□□□□ -1.99
RPH1P39956 tW(CCA)PtW(CCA)P 72 nt2.62□□□□□ -1.99
RPH1P39956 YLR101CYLR101C 396 nt2.62□□□□□ -1.99
RPH1P39956 RPL23AYBL087C 414 nt2.62□□□□□ -1.99
RPH1P39956 IRC16YPR038W 360 nt2.62□□□□□ -1.99
RPH1P39956 PSY2YNL201C 2577 nt2.62□□□□□ -1.99
RPH1P39956 MNT3YIL014W 1893 nt2.62□□□□□ -1.99
RPH1P39956 VHR2YER064C 1518 nt2.62□□□□□ -1.99
RPH1P39956 CYR1YJL005W 6081 nt2.62□□□□□ -1.99
RPH1P39956 JJJ2YJL162C 1752 nt2.61□□□□□ -1.99
RPH1P39956 ESC1YMR219W 4977 nt2.61□□□□□ -1.99
RPH1P39956 KEL2YGR238C 2649 nt2.61□□□□□ -1.99
RPH1P39956 NAB3YPL190C 2409 nt2.61□□□□□ -1.99
RPH1P39956 RTR2YDR066C 591 nt2.61□□□□□ -1.99
RPH1P39956 YDR269CYDR269C 324 nt2.61□□□□□ -1.99
RPH1P39956 YER079WYER079W 633 nt2.61□□□□□ -1.99
RPH1P39956 YHL009W-AYHL009W-A 1242 nt2.61□□□□□ -1.99
RPH1P39956 YIL174WYIL174W 228 nt2.61□□□□□ -1.99
RPH1P39956 YJL222W-AYJL222W-A 228 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms