Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COL5A1P20908 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.92■□□□□ 0.78
COL5A1P20908 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL5A1P20908 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL5A1P20908 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
COL5A1P20908 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.92■□□□□ 0.78
COL5A1P20908 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL5A1P20908 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.91■□□□□ 0.78
COL5A1P20908 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A1P20908 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A1P20908 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A1P20908 AL355075.4-201ENST00000554988 638 ntBASIC19.91■□□□□ 0.78
COL5A1P20908 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.91■□□□□ 0.78
COL5A1P20908 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL5A1P20908 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL5A1P20908 AL117328.2-201ENST00000624617 1940 ntBASIC19.91■□□□□ 0.78
COL5A1P20908 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A1P20908 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL5A1P20908 MIR1224-201ENST00000408193 85 ntBASIC19.9■□□□□ 0.78
COL5A1P20908 AC211429.1-201ENST00000415277 523 ntBASIC19.9■□□□□ 0.78
COL5A1P20908 PGM5P4-201ENST00000421970 445 ntBASIC19.9■□□□□ 0.78
COL5A1P20908 TSPY7P-201ENST00000431358 1114 ntBASIC19.9■□□□□ 0.78
COL5A1P20908 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
COL5A1P20908 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL5A1P20908 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.9■□□□□ 0.78
COL5A1P20908 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.9■□□□□ 0.78
COL5A1P20908 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 AC010331.1-201ENST00000611423 582 ntBASIC19.9■□□□□ 0.78
COL5A1P20908 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A1P20908 AL356652.1-201ENST00000615962 565 ntBASIC19.9■□□□□ 0.78
COL5A1P20908 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.9■□□□□ 0.78
COL5A1P20908 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A1P20908 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.9■□□□□ 0.78
COL5A1P20908 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL5A1P20908 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL5A1P20908 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.89■□□□□ 0.77
COL5A1P20908 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 AL135905.2-201ENST00000584934 1404 ntBASIC19.89■□□□□ 0.77
COL5A1P20908 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL5A1P20908 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.89■□□□□ 0.77
COL5A1P20908 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 REXO1L12P-201ENST00000622156 912 ntBASIC19.89■□□□□ 0.77
COL5A1P20908 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.89■□□□□ 0.77
COL5A1P20908 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A1P20908 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.89■□□□□ 0.77
COL5A1P20908 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL5A1P20908 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
COL5A1P20908 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.88■□□□□ 0.77
COL5A1P20908 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.88■□□□□ 0.77
COL5A1P20908 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.88■□□□□ 0.77
COL5A1P20908 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL5A1P20908 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A1P20908 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms