Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF13O43567 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF13O43567 KRT18P14-201ENST00000534205 1250 ntBASIC18.67■□□□□ 0.58
RNF13O43567 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF13O43567 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 AC104187.1-201ENST00000607510 612 ntBASIC18.67■□□□□ 0.58
RNF13O43567 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF13O43567 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF13O43567 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF13O43567 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF13O43567 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF13O43567 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF13O43567 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF13O43567 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF13O43567 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF13O43567 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF13O43567 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF13O43567 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF13O43567 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF13O43567 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF13O43567 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 AC006128.1-201ENST00000624704 1661 ntBASIC18.66■□□□□ 0.58
RNF13O43567 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF13O43567 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF13O43567 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF13O43567 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF13O43567 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF13O43567 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF13O43567 AC007952.6-201ENST00000573168 2673 ntBASIC18.65■□□□□ 0.58
RNF13O43567 AC003957.1-201ENST00000625108 2673 ntBASIC18.65■□□□□ 0.58
RNF13O43567 PLK5-205ENST00000642079 1969 ntBASIC18.65■□□□□ 0.58
RNF13O43567 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF13O43567 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L2-201ENST00000561772 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L6-201ENST00000626483 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L1-201ENST00000627662 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L8-201ENST00000629013 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L3-201ENST00000630187 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L7-201ENST00000630678 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 DUX4L5-201ENST00000630834 1275 ntBASIC18.65■□□□□ 0.58
RNF13O43567 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF13O43567 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF13O43567 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF13O43567 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF13O43567 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF13O43567 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF13O43567 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.64■□□□□ 0.58
RNF13O43567 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF13O43567 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF13O43567 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF13O43567 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF13O43567 AC073314.1-201ENST00000568729 2216 ntBASIC18.64■□□□□ 0.57
RNF13O43567 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF13O43567 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF13O43567 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF13O43567 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF13O43567 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF13O43567 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF13O43567 AC010141.2-201ENST00000452426 721 ntBASIC18.64■□□□□ 0.57
RNF13O43567 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF13O43567 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF13O43567 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF13O43567 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF13O43567 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF13O43567 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNF13O43567 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF13O43567 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RNF13O43567 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF13O43567 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms