Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.67■□□□□ 0.58
HMG20AQ9NP66 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.67■□□□□ 0.58
HMG20AQ9NP66 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 KRT16P3-201ENST00000439127 1283 ntBASIC18.66■□□□□ 0.58
HMG20AQ9NP66 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 AC020907.5-201ENST00000624372 1936 ntBASIC18.66■□□□□ 0.58
HMG20AQ9NP66 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20AQ9NP66 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 AC027702.1-201ENST00000563810 1770 ntBASIC18.65■□□□□ 0.58
HMG20AQ9NP66 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20AQ9NP66 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20AQ9NP66 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20AQ9NP66 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20AQ9NP66 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20AQ9NP66 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 AL117332.1-201ENST00000622628 974 ntBASIC18.64■□□□□ 0.57
HMG20AQ9NP66 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 AC026471.6-201ENST00000622954 1905 ntBASIC18.64■□□□□ 0.57
HMG20AQ9NP66 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20AQ9NP66 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20AQ9NP66 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms