Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Golgb1-201ENSMUST00000023534 498 ntBASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgn3Q9DCB1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Gm12922-201ENSMUST00000120626 809 ntBASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgn3Q9DCB1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgn3Q9DCB1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgn3Q9DCB1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Hmgn3Q9DCB1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgn3Q9DCB1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgn3Q9DCB1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgn3Q9DCB1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Hmgn3Q9DCB1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms