Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 AC242852.2-201ENST00000615738 1807 ntBASIC21.87■■□□□ 1.09
RNF135Q8IUD6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF135Q8IUD6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF135Q8IUD6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RNF135Q8IUD6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 KRT17P1-201ENST00000399211 1546 ntBASIC21.84■■□□□ 1.09
RNF135Q8IUD6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF135Q8IUD6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 POU5F1P4-201ENST00000413175 1085 ntBASIC21.83■■□□□ 1.09
RNF135Q8IUD6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF135Q8IUD6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.83■■□□□ 1.08
RNF135Q8IUD6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.83■■□□□ 1.08
RNF135Q8IUD6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.83■■□□□ 1.08
RNF135Q8IUD6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF135Q8IUD6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF135Q8IUD6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 AL034346.1-201ENST00000568244 1277 ntBASIC21.82■■□□□ 1.08
RNF135Q8IUD6 AC233263.1-201ENST00000578059 224 ntBASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms