Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP45Q70EL2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP45Q70EL2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.7■□□□□ 0.9
USP45Q70EL2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP45Q70EL2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP45Q70EL2 AC011484.1-201ENST00000377652 1995 ntBASIC20.69■□□□□ 0.9
USP45Q70EL2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.69■□□□□ 0.9
USP45Q70EL2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP45Q70EL2 AC083906.2-201ENST00000511578 360 ntBASIC20.69■□□□□ 0.9
USP45Q70EL2 AC105036.2-201ENST00000569468 176 ntBASIC20.69■□□□□ 0.9
USP45Q70EL2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP45Q70EL2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.69■□□□□ 0.9
USP45Q70EL2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.69■□□□□ 0.9
USP45Q70EL2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP45Q70EL2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
USP45Q70EL2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP45Q70EL2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP45Q70EL2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP45Q70EL2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.68■□□□□ 0.9
USP45Q70EL2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
USP45Q70EL2 AL512625.2-201ENST00000417533 625 ntBASIC20.68■□□□□ 0.9
USP45Q70EL2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.68■□□□□ 0.9
USP45Q70EL2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
USP45Q70EL2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.68■□□□□ 0.9
USP45Q70EL2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP45Q70EL2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP45Q70EL2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
USP45Q70EL2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP45Q70EL2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.67■□□□□ 0.9
USP45Q70EL2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
USP45Q70EL2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP45Q70EL2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.67■□□□□ 0.9
USP45Q70EL2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
USP45Q70EL2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.66■□□□□ 0.9
USP45Q70EL2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USP45Q70EL2 ID1-201ENST00000376105 1233 ntBASIC20.66■□□□□ 0.9
USP45Q70EL2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.66■□□□□ 0.9
USP45Q70EL2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.66■□□□□ 0.9
USP45Q70EL2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.66■□□□□ 0.9
USP45Q70EL2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 AC121338.2-201ENST00000622535 1744 ntBASIC20.66■□□□□ 0.9
USP45Q70EL2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP45Q70EL2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP45Q70EL2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.66■□□□□ 0.9
USP45Q70EL2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
USP45Q70EL2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
USP45Q70EL2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
USP45Q70EL2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.65■□□□□ 0.9
USP45Q70EL2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.65■□□□□ 0.9
USP45Q70EL2 SLC29A4P1-201ENST00000398760 971 ntBASIC20.65■□□□□ 0.9
USP45Q70EL2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.65■□□□□ 0.9
USP45Q70EL2 AC093787.1-201ENST00000450396 207 ntBASIC20.65■□□□□ 0.9
USP45Q70EL2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.65■□□□□ 0.9
USP45Q70EL2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
USP45Q70EL2 AL109923.1-201ENST00000618799 583 ntBASIC20.65■□□□□ 0.9
USP45Q70EL2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.65■□□□□ 0.9
USP45Q70EL2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP45Q70EL2 MKRN4P-201ENST00000444706 1521 ntBASIC20.64■□□□□ 0.9
USP45Q70EL2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USP45Q70EL2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP45Q70EL2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.64■□□□□ 0.89
USP45Q70EL2 AC007375.3-201ENST00000600936 2314 ntBASIC20.64■□□□□ 0.89
USP45Q70EL2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP45Q70EL2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms