Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX6-1P78426 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX6-1P78426 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NKX6-1P78426 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NKX6-1P78426 AC061975.6-201ENST00000579045 1553 ntBASIC18.1■□□□□ 0.49
NKX6-1P78426 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.1■□□□□ 0.49
NKX6-1P78426 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-1P78426 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-1P78426 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-1P78426 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-1P78426 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-1P78426 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.1■□□□□ 0.49
NKX6-1P78426 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NKX6-1P78426 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX6-1P78426 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.1■□□□□ 0.49
NKX6-1P78426 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX6-1P78426 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.09■□□□□ 0.49
NKX6-1P78426 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NKX6-1P78426 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NKX6-1P78426 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 RPS2P52-201ENST00000469610 820 ntBASIC18.09■□□□□ 0.49
NKX6-1P78426 TERF1P5-201ENST00000477545 1207 ntBASIC18.09■□□□□ 0.49
NKX6-1P78426 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.09■□□□□ 0.49
NKX6-1P78426 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.09■□□□□ 0.49
NKX6-1P78426 AC008694.1-202ENST00000636953 945 ntBASIC18.09■□□□□ 0.49
NKX6-1P78426 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NKX6-1P78426 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX6-1P78426 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.08■□□□□ 0.49
NKX6-1P78426 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.08■□□□□ 0.49
NKX6-1P78426 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
NKX6-1P78426 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX6-1P78426 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX6-1P78426 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.08■□□□□ 0.49
NKX6-1P78426 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NKX6-1P78426 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-1P78426 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-1P78426 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX6-1P78426 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
NKX6-1P78426 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.08■□□□□ 0.48
NKX6-1P78426 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX6-1P78426 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.08■□□□□ 0.48
NKX6-1P78426 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
NKX6-1P78426 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-1P78426 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.08■□□□□ 0.48
NKX6-1P78426 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX6-1P78426 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-1P78426 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NKX6-1P78426 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX6-1P78426 AC007375.3-201ENST00000600936 2314 ntBASIC18.07■□□□□ 0.48
NKX6-1P78426 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX6-1P78426 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX6-1P78426 AC068338.2-201ENST00000563278 1430 ntBASIC18.07■□□□□ 0.48
NKX6-1P78426 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NKX6-1P78426 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX6-1P78426 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.07■□□□□ 0.48
NKX6-1P78426 DUSP5P2-201ENST00000426873 1033 ntBASIC18.07■□□□□ 0.48
NKX6-1P78426 CYP2T1P-201ENST00000432607 1285 ntBASIC18.07■□□□□ 0.48
NKX6-1P78426 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX6-1P78426 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
NKX6-1P78426 OR10C1-204ENST00000622521 1039 ntBASIC18.07■□□□□ 0.48
NKX6-1P78426 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX6-1P78426 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-1P78426 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NKX6-1P78426 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-1P78426 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms