Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLRN1P58418 RARRES2P6-201ENST00000567333 442 ntBASIC18.39■□□□□ 0.53
CLRN1P58418 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.39■□□□□ 0.53
CLRN1P58418 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLRN1P58418 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLRN1P58418 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLRN1P58418 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.39■□□□□ 0.53
CLRN1P58418 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.39■□□□□ 0.53
CLRN1P58418 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLRN1P58418 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLRN1P58418 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLRN1P58418 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLRN1P58418 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CLRN1P58418 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLRN1P58418 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CLRN1P58418 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.38■□□□□ 0.53
CLRN1P58418 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.38■□□□□ 0.53
CLRN1P58418 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CLRN1P58418 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLRN1P58418 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.38■□□□□ 0.53
CLRN1P58418 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.38■□□□□ 0.53
CLRN1P58418 KRT18P61-201ENST00000585825 1298 ntBASIC18.38■□□□□ 0.53
CLRN1P58418 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CLRN1P58418 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.38■□□□□ 0.53
CLRN1P58418 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.38■□□□□ 0.53
CLRN1P58418 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.38■□□□□ 0.53
CLRN1P58418 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLRN1P58418 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLRN1P58418 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.37■□□□□ 0.53
CLRN1P58418 AC011484.1-201ENST00000377652 1995 ntBASIC18.37■□□□□ 0.53
CLRN1P58418 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLRN1P58418 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CLRN1P58418 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.37■□□□□ 0.53
CLRN1P58418 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.37■□□□□ 0.53
CLRN1P58418 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.37■□□□□ 0.53
CLRN1P58418 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.37■□□□□ 0.53
CLRN1P58418 UBE2DNL-204ENST00000602536 740 ntBASIC18.37■□□□□ 0.53
CLRN1P58418 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.37■□□□□ 0.53
CLRN1P58418 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.37■□□□□ 0.53
CLRN1P58418 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLRN1P58418 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLRN1P58418 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.37■□□□□ 0.53
CLRN1P58418 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLRN1P58418 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLRN1P58418 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLRN1P58418 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLRN1P58418 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.36■□□□□ 0.53
CLRN1P58418 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLRN1P58418 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLRN1P58418 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.36■□□□□ 0.53
CLRN1P58418 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.36■□□□□ 0.53
CLRN1P58418 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.36■□□□□ 0.53
CLRN1P58418 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 SLC7A5P1-201ENST00000568957 537 ntBASIC18.36■□□□□ 0.53
CLRN1P58418 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.36■□□□□ 0.53
CLRN1P58418 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLRN1P58418 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.36■□□□□ 0.53
CLRN1P58418 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.36■□□□□ 0.53
CLRN1P58418 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.35■□□□□ 0.53
CLRN1P58418 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLRN1P58418 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLRN1P58418 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms