Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.08■□□□□ 0.48
CX3CR1P49238 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CR1P49238 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CX3CR1P49238 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CX3CR1P49238 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CR1P49238 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
CX3CR1P49238 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CX3CR1P49238 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.07■□□□□ 0.48
CX3CR1P49238 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.07■□□□□ 0.48
CX3CR1P49238 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CX3CR1P49238 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.07■□□□□ 0.48
CX3CR1P49238 YBX1P1-201ENST00000445822 960 ntBASIC18.07■□□□□ 0.48
CX3CR1P49238 AC010141.2-201ENST00000452426 721 ntBASIC18.07■□□□□ 0.48
CX3CR1P49238 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.07■□□□□ 0.48
CX3CR1P49238 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CX3CR1P49238 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.07■□□□□ 0.48
CX3CR1P49238 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.07■□□□□ 0.48
CX3CR1P49238 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CR1P49238 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.06■□□□□ 0.48
CX3CR1P49238 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.06■□□□□ 0.48
CX3CR1P49238 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CX3CR1P49238 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CX3CR1P49238 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CX3CR1P49238 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.06■□□□□ 0.48
CX3CR1P49238 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CX3CR1P49238 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CX3CR1P49238 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.06■□□□□ 0.48
CX3CR1P49238 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.06■□□□□ 0.48
CX3CR1P49238 AC104187.1-201ENST00000607510 612 ntBASIC18.06■□□□□ 0.48
CX3CR1P49238 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CR1P49238 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.06■□□□□ 0.48
CX3CR1P49238 KRT16P2-201ENST00000414673 1423 ntBASIC18.06■□□□□ 0.48
CX3CR1P49238 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CX3CR1P49238 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.06■□□□□ 0.48
CX3CR1P49238 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 AC011484.1-201ENST00000377652 1995 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L2-201ENST00000561772 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L6-201ENST00000626483 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L1-201ENST00000627662 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L8-201ENST00000629013 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L3-201ENST00000630187 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L7-201ENST00000630678 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 DUX4L5-201ENST00000630834 1275 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.05■□□□□ 0.48
CX3CR1P49238 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CX3CR1P49238 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CX3CR1P49238 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CR1P49238 AC007225.1-201ENST00000566331 1836 ntBASIC18.05■□□□□ 0.48
CX3CR1P49238 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CX3CR1P49238 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.04■□□□□ 0.48
CX3CR1P49238 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.04■□□□□ 0.48
CX3CR1P49238 AC245052.3-201ENST00000450182 901 ntBASIC18.04■□□□□ 0.48
CX3CR1P49238 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.04■□□□□ 0.48
CX3CR1P49238 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.04■□□□□ 0.48
CX3CR1P49238 TERF1P2-201ENST00000583350 1212 ntBASIC18.04■□□□□ 0.48
CX3CR1P49238 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.04■□□□□ 0.48
CX3CR1P49238 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CX3CR1P49238 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.04■□□□□ 0.48
CX3CR1P49238 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CX3CR1P49238 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CX3CR1P49238 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 AC073314.1-201ENST00000568729 2216 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms