Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	YDL009C	YDL009C	324 nt		3.16	□□□□□ -1.9
SKP2	P42843	RRF1	YHR038W	693 nt		3.16	□□□□□ -1.9
SKP2	P42843	TOM22	YNL131W	459 nt		3.16	□□□□□ -1.9
SKP2	P42843	YOL085W-A	YOL085W-A	213 nt		3.16	□□□□□ -1.9
SKP2	P42843	ATX2	YOR079C	942 nt		3.16	□□□□□ -1.9
SKP2	P42843	YPR096C	YPR096C	303 nt		3.16	□□□□□ -1.9
SKP2	P42843	CHA4	YLR098C	1947 nt		3.16	□□□□□ -1.9
SKP2	P42843	PDC2	YDR081C	2778 nt		3.16	□□□□□ -1.9
SKP2	P42843	YRR1	YOR162C	2433 nt		3.15	□□□□□ -1.9
SKP2	P42843	GDI1	YER136W	1356 nt		3.15	□□□□□ -1.9
SKP2	P42843	BMS1	YPL217C	3552 nt		3.15	□□□□□ -1.9
SKP2	P42843	AHC2	YCR082W	387 nt		3.15	□□□□□ -1.91
SKP2	P42843	RPI1	YIL119C	1224 nt		3.15	□□□□□ -1.91
SKP2	P42843	PAU23	YLR037C	375 nt		3.15	□□□□□ -1.91
SKP2	P42843	RPL36B	YPL249C-A	303 nt		3.15	□□□□□ -1.91
SKP2	P42843	DIA2	YOR080W	2199 nt		3.15	□□□□□ -1.91
SKP2	P42843	YOR192C-A	YOR192C-A	1317 nt		3.15	□□□□□ -1.91
SKP2	P42843	DNA2	YHR164C	4569 nt		3.15	□□□□□ -1.91
SKP2	P42843	SRB4	YER022W	2064 nt		3.15	□□□□□ -1.91
SKP2	P42843	SPO14	YKR031C	5052 nt		3.15	□□□□□ -1.91
SKP2	P42843	MDM1	YML104C	3384 nt		3.14	□□□□□ -1.91
SKP2	P42843	PUG1	YER185W	912 nt		3.14	□□□□□ -1.91
SKP2	P42843	RPL30	YGL030W	318 nt		3.14	□□□□□ -1.91
SKP2	P42843	YGL042C	YGL042C	306 nt		3.14	□□□□□ -1.91
SKP2	P42843	IRC19	YLL033W	693 nt		3.14	□□□□□ -1.91
SKP2	P42843	AFB1	YLR040C	675 nt		3.14	□□□□□ -1.91
SKP2	P42843	CDC123	YLR215C	1083 nt		3.14	□□□□□ -1.91
SKP2	P42843	RHO5	YNL180C	996 nt		3.14	□□□□□ -1.91
SKP2	P42843	LEE1	YPL054W	906 nt		3.14	□□□□□ -1.91
SKP2	P42843	ARP4	YJL081C	1470 nt		3.14	□□□□□ -1.91
SKP2	P42843	TAF2	YCR042C	4224 nt		3.14	□□□□□ -1.91
SKP2	P42843	AI2	Q0055	2565 nt		3.13	□□□□□ -1.91
SKP2	P42843	YCK2	YNL154C	1641 nt		3.13	□□□□□ -1.91
SKP2	P42843	YDR114C	YDR114C	303 nt		3.13	□□□□□ -1.91
SKP2	P42843	ERP6	YGL002W	651 nt		3.13	□□□□□ -1.91
SKP2	P42843	RPL16A	YIL133C	600 nt		3.13	□□□□□ -1.91
SKP2	P42843	RIO2	YNL207W	1278 nt		3.13	□□□□□ -1.91
SKP2	P42843	STT4	YLR305C	5703 nt		3.13	□□□□□ -1.91
SKP2	P42843	AVT2	YEL064C	1443 nt		3.12	□□□□□ -1.91
SKP2	P42843	AGA2	YGL032C	264 nt		3.12	□□□□□ -1.91
SKP2	P42843	COX13	YGL191W	390 nt		3.12	□□□□□ -1.91
SKP2	P42843	LSM8	YJR022W	330 nt		3.12	□□□□□ -1.91
SKP2	P42843	MRPL38	YKL170W	417 nt		3.12	□□□□□ -1.91
SKP2	P42843	IGO1	YNL157W	507 nt		3.12	□□□□□ -1.91
SKP2	P42843	SVS1	YPL163C	783 nt		3.12	□□□□□ -1.91
SKP2	P42843	YPR050C	YPR050C	414 nt		3.12	□□□□□ -1.91
SKP2	P42843	TSC11	YER093C	4293 nt		3.12	□□□□□ -1.91
SKP2	P42843	RRI2	YOL117W	1938 nt		3.12	□□□□□ -1.91
SKP2	P42843	UBP16	YPL072W	1500 nt		3.12	□□□□□ -1.91
SKP2	P42843	JJJ2	YJL162C	1752 nt		3.12	□□□□□ -1.91
SKP2	P42843	YIL082W-A	YIL082W-A	4497 nt		3.12	□□□□□ -1.91
SKP2	P42843	ROM1	YGR070W	3468 nt		3.12	□□□□□ -1.91
SKP2	P42843	YHL005C	YHL005C	393 nt		3.11	□□□□□ -1.91
SKP2	P42843	YHL046W-A	YHL046W-A	327 nt		3.11	□□□□□ -1.91
SKP2	P42843	SPO13	YHR014W	876 nt		3.11	□□□□□ -1.91
SKP2	P42843	YIL012W	YIL012W	342 nt		3.11	□□□□□ -1.91
SKP2	P42843	CCW14	YLR390W-A	717 nt		3.11	□□□□□ -1.91
SKP2	P42843	NGL1	YOL042W	1092 nt		3.11	□□□□□ -1.91
SKP2	P42843	FYV12	YOR183W	390 nt		3.11	□□□□□ -1.91
SKP2	P42843	NMD2	YHR077C	3270 nt		3.11	□□□□□ -1.91
SKP2	P42843	SLP1	YOR154W	1764 nt		3.1	□□□□□ -1.91
SKP2	P42843	FLO1	YAR050W	4614 nt		3.1	□□□□□ -1.91
SKP2	P42843	YGL015C	YGL015C	393 nt		3.1	□□□□□ -1.91
SKP2	P42843	tW(CCA)G1	tW(CCA)G1	72 nt		3.1	□□□□□ -1.91
SKP2	P42843	tW(CCA)G2	tW(CCA)G2	72 nt		3.1	□□□□□ -1.91
SKP2	P42843	tW(CCA)J	tW(CCA)J	72 nt		3.1	□□□□□ -1.91
SKP2	P42843	tW(CCA)K	tW(CCA)K	72 nt		3.1	□□□□□ -1.91
SKP2	P42843	tW(CCA)M	tW(CCA)M	72 nt		3.1	□□□□□ -1.91
SKP2	P42843	tW(CCA)P	tW(CCA)P	72 nt		3.1	□□□□□ -1.91
SKP2	P42843	YNL179C	YNL179C	438 nt		3.1	□□□□□ -1.91
SKP2	P42843	YOL159C-A	YOL159C-A	273 nt		3.1	□□□□□ -1.91
SKP2	P42843	snR43	snR43	209 nt		3.1	□□□□□ -1.91
SKP2	P42843	PUF6	YDR496C	1971 nt		3.1	□□□□□ -1.91
SKP2	P42843	ILS1	YBL076C	3219 nt		3.1	□□□□□ -1.91
SKP2	P42843	YDR210W-B	YDR210W-B	5313 nt		3.09	□□□□□ -1.91
SKP2	P42843	YDR261W-B	YDR261W-B	5313 nt		3.09	□□□□□ -1.91
SKP2	P42843	YFL002W-A	YFL002W-A	5313 nt		3.09	□□□□□ -1.91
SKP2	P42843	YGR161W-B	YGR161W-B	5313 nt		3.09	□□□□□ -1.91
SKP2	P42843	YLR410W-B	YLR410W-B	5313 nt		3.09	□□□□□ -1.91
SKP2	P42843	YCL019W	YCL019W	5313 nt		3.09	□□□□□ -1.91
SKP2	P42843	ATP22	YDR350C	2055 nt		3.09	□□□□□ -1.91
SKP2	P42843	RCY1	YJL204C	2523 nt		3.09	□□□□□ -1.91
SKP2	P42843	YAP3	YHL009C	993 nt		3.09	□□□□□ -1.91
SKP2	P42843	YHR130C	YHR130C	336 nt		3.09	□□□□□ -1.91
SKP2	P42843	RPL6A	YML073C	531 nt		3.09	□□□□□ -1.91
SKP2	P42843	PBI2	YNL015W	228 nt		3.09	□□□□□ -1.91
SKP2	P42843	YOR293C-A	YOR293C-A	150 nt		3.09	□□□□□ -1.91
SKP2	P42843	SSF1	YHR066W	1362 nt		3.09	□□□□□ -1.92
SKP2	P42843	MED1	YPR070W	1701 nt		3.08	□□□□□ -1.92
SKP2	P42843	YKL100C	YKL100C	1764 nt		3.08	□□□□□ -1.92
SKP2	P42843	MET5	YJR137C	4329 nt		3.08	□□□□□ -1.92
SKP2	P42843	RPS26B	YER131W	360 nt		3.08	□□□□□ -1.92
SKP2	P42843	GLC7	YER133W	939 nt		3.08	□□□□□ -1.92
SKP2	P42843	DAD2	YKR083C	402 nt		3.08	□□□□□ -1.92
SKP2	P42843	YLR171W	YLR171W	390 nt		3.08	□□□□□ -1.92
SKP2	P42843	YML037C	YML037C	1023 nt		3.08	□□□□□ -1.92
SKP2	P42843	YMR294W-A	YMR294W-A	360 nt		3.08	□□□□□ -1.92
SKP2	P42843	YNL058C	YNL058C	951 nt		3.08	□□□□□ -1.92
SKP2	P42843	RRT16	YNL105W	429 nt		3.08	□□□□□ -1.92
SKP2	P42843	YOR105W	YOR105W	327 nt		3.08	□□□□□ -1.92

Retrieved 100 of 7,029 protein–RNA pairs in 19 ms