Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YGR051CYGR051C 324 nt4.17□□□□□ -1.74
MSH4P40965 RNR4YGR180C 1038 nt4.17□□□□□ -1.74
MSH4P40965 YLR031WYLR031W 561 nt4.17□□□□□ -1.74
MSH4P40965 YMR294W-AYMR294W-A 360 nt4.17□□□□□ -1.74
MSH4P40965 TIM18YOR297C 579 nt4.17□□□□□ -1.74
MSH4P40965 TSC3YBR058C-A 243 nt4.17□□□□□ -1.74
MSH4P40965 snR36snR36 182 nt4.17□□□□□ -1.74
MSH4P40965 STU1YBL034C 4542 nt4.17□□□□□ -1.74
MSH4P40965 CPA2YJR109C 3357 nt4.17□□□□□ -1.74
MSH4P40965 SPT10YJL127C 1923 nt4.17□□□□□ -1.74
MSH4P40965 YHR212CYHR212C 336 nt4.16□□□□□ -1.74
MSH4P40965 YKL156C-AYKL156C-A 117 nt4.16□□□□□ -1.74
MSH4P40965 YAR060CYAR060C 336 nt4.16□□□□□ -1.74
MSH4P40965 RPL19BYBL027W 570 nt4.16□□□□□ -1.74
MSH4P40965 snR35snR35 204 nt4.16□□□□□ -1.74
MSH4P40965 YLR352WYLR352W 2424 nt4.16□□□□□ -1.74
MSH4P40965 CCM1YGR150C 2595 nt4.15□□□□□ -1.74
MSH4P40965 PMT6YGR199W 2280 nt4.15□□□□□ -1.74
MSH4P40965 EMI1YDR512C 564 nt4.15□□□□□ -1.75
MSH4P40965 RPL22AYLR061W 366 nt4.15□□□□□ -1.75
MSH4P40965 YNL198CYNL198C 303 nt4.15□□□□□ -1.75
MSH4P40965 ATP25YMR098C 1839 nt4.15□□□□□ -1.75
MSH4P40965 RNH70YGR276C 1662 nt4.15□□□□□ -1.75
MSH4P40965 SKN7YHR206W 1869 nt4.15□□□□□ -1.75
MSH4P40965 RAD2YGR258C 3096 nt4.14□□□□□ -1.75
MSH4P40965 YHR214C-EYHR214C-E 300 nt4.14□□□□□ -1.75
MSH4P40965 YAR070CYAR070C 300 nt4.14□□□□□ -1.75
MSH4P40965 PEX17YNL214W 600 nt4.14□□□□□ -1.75
MSH4P40965 BIL1YOR304C-A 231 nt4.14□□□□□ -1.75
MSH4P40965 PRP22YER013W 3438 nt4.14□□□□□ -1.75
MSH4P40965 EAP1YKL204W 1899 nt4.13□□□□□ -1.75
MSH4P40965 YDR193WYDR193W 399 nt4.13□□□□□ -1.75
MSH4P40965 PAU10YDR542W 363 nt4.13□□□□□ -1.75
MSH4P40965 YFL065CYFL065C 309 nt4.13□□□□□ -1.75
MSH4P40965 PAU11YGL261C 363 nt4.13□□□□□ -1.75
MSH4P40965 MVB12YGR206W 306 nt4.13□□□□□ -1.75
MSH4P40965 YIL046W-AYIL046W-A 165 nt4.13□□□□□ -1.75
MSH4P40965 PAU4YLR461W 363 nt4.13□□□□□ -1.75
MSH4P40965 YPS6YIR039C 1614 nt4.13□□□□□ -1.75
MSH4P40965 YNL193WYNL193W 1677 nt4.13□□□□□ -1.75
MSH4P40965 YGR027W-BYGR027W-B 5268 nt4.12□□□□□ -1.75
MSH4P40965 YLR227W-BYLR227W-B 5268 nt4.12□□□□□ -1.75
MSH4P40965 YPR158C-DYPR158C-D 5268 nt4.12□□□□□ -1.75
MSH4P40965 YGL074CYGL074C 327 nt4.12□□□□□ -1.75
MSH4P40965 LSM8YJR022W 330 nt4.12□□□□□ -1.75
MSH4P40965 SHE2YKL130C 741 nt4.12□□□□□ -1.75
MSH4P40965 ISF1YMR081C 1017 nt4.12□□□□□ -1.75
MSH4P40965 RPL16BYNL069C 597 nt4.12□□□□□ -1.75
MSH4P40965 YOR146WYOR146W 306 nt4.12□□□□□ -1.75
MSH4P40965 CHS3YBR023C 3498 nt4.12□□□□□ -1.75
MSH4P40965 YLR177WYLR177W 1887 nt4.11□□□□□ -1.75
MSH4P40965 SNA4YDL123W 423 nt4.11□□□□□ -1.75
MSH4P40965 RMT2YDR465C 1239 nt4.11□□□□□ -1.75
MSH4P40965 MTC3YGL226W 372 nt4.11□□□□□ -1.75
MSH4P40965 YGR265WYGR265W 411 nt4.11□□□□□ -1.75
MSH4P40965 HHF2YNL030W 312 nt4.11□□□□□ -1.75
MSH4P40965 OSH3YHR073W 2991 nt4.1□□□□□ -1.75
MSH4P40965 PEX5YDR244W 1839 nt4.1□□□□□ -1.75
MSH4P40965 UTP13YLR222C 2454 nt4.1□□□□□ -1.75
MSH4P40965 NDT80YHR124W 1884 nt4.1□□□□□ -1.75
MSH4P40965 tC(GCA)BtC(GCA)B 72 nt4.1□□□□□ -1.75
MSH4P40965 tC(GCA)GtC(GCA)G 72 nt4.1□□□□□ -1.75
MSH4P40965 tC(GCA)P1tC(GCA)P1 72 nt4.1□□□□□ -1.75
MSH4P40965 tC(GCA)P2tC(GCA)P2 72 nt4.1□□□□□ -1.75
MSH4P40965 RPS8BYER102W 603 nt4.1□□□□□ -1.75
MSH4P40965 YJL015CYJL015C 285 nt4.1□□□□□ -1.75
MSH4P40965 LSM1YJL124C 519 nt4.1□□□□□ -1.75
MSH4P40965 JIP3YLR331C 378 nt4.1□□□□□ -1.75
MSH4P40965 YMR046W-AYMR046W-A 129 nt4.1□□□□□ -1.75
MSH4P40965 YBL108WYBL108W 306 nt4.1□□□□□ -1.75
MSH4P40965 PEX11YOL147C 711 nt4.1□□□□□ -1.75
MSH4P40965 YPL152W-AYPL152W-A 99 nt4.1□□□□□ -1.75
MSH4P40965 YPR053CYPR053C 456 nt4.1□□□□□ -1.75
MSH4P40965 PIS1YPR113W 663 nt4.1□□□□□ -1.75
MSH4P40965 CIN1YOR349W 3045 nt4.1□□□□□ -1.75
MSH4P40965 BYE1YKL005C 1785 nt4.09□□□□□ -1.75
MSH4P40965 ALA1YOR335C 2877 nt4.09□□□□□ -1.75
MSH4P40965 MSD1YPL104W 1977 nt4.09□□□□□ -1.75
MSH4P40965 MKT1YNL085W 2493 nt4.09□□□□□ -1.75
MSH4P40965 TRX3YCR083W 384 nt4.09□□□□□ -1.75
MSH4P40965 YKL033W-AYKL033W-A 711 nt4.09□□□□□ -1.75
MSH4P40965 CWC24YLR323C 780 nt4.09□□□□□ -1.75
MSH4P40965 VAC14YLR386W 2643 nt4.09□□□□□ -1.75
MSH4P40965 TMA108YIL137C 2841 nt4.09□□□□□ -1.75
MSH4P40965 PCK1YKR097W 1650 nt4.09□□□□□ -1.76
MSH4P40965 MUB1YMR100W 1863 nt4.09□□□□□ -1.76
MSH4P40965 YGR237CYGR237C 2358 nt4.09□□□□□ -1.76
MSH4P40965 RRN6YBL014C 2685 nt4.08□□□□□ -1.76
MSH4P40965 HBT1YDL223C 3141 nt4.08□□□□□ -1.76
MSH4P40965 NIC96YFR002W 2520 nt4.08□□□□□ -1.76
MSH4P40965 VEL1YGL258W 621 nt4.08□□□□□ -1.76
MSH4P40965 GSC2YGR032W 5688 nt4.08□□□□□ -1.76
MSH4P40965 DIE2YGR227W 1578 nt4.08□□□□□ -1.76
MSH4P40965 HCH1YNL281W 462 nt4.08□□□□□ -1.76
MSH4P40965 AKR1YDR264C 2295 nt4.07□□□□□ -1.76
MSH4P40965 MED1YPR070W 1701 nt4.07□□□□□ -1.76
MSH4P40965 LYS9YNR050C 1341 nt4.07□□□□□ -1.76
MSH4P40965 YDR406W-AYDR406W-A 246 nt4.07□□□□□ -1.76
MSH4P40965 YGL042CYGL042C 306 nt4.07□□□□□ -1.76
MSH4P40965 YGR069WYGR069W 336 nt4.07□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 53.9 ms