Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC28A2O43868 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 ESRRAP1-201ENST00000400596 1257 ntBASIC19.81■□□□□ 0.76
SLC28A2O43868 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC28A2O43868 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC28A2O43868 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.81■□□□□ 0.76
SLC28A2O43868 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC28A2O43868 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SLC28A2O43868 MYCNOS-205ENST00000641950 531 ntBASIC19.81■□□□□ 0.76
SLC28A2O43868 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC28A2O43868 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC28A2O43868 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC28A2O43868 AC003102.1-202ENST00000563394 1796 ntBASIC19.8■□□□□ 0.76
SLC28A2O43868 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC28A2O43868 UNC93B4-201ENST00000505679 747 ntBASIC19.8■□□□□ 0.76
SLC28A2O43868 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SLC28A2O43868 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SLC28A2O43868 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC28A2O43868 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC28A2O43868 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC28A2O43868 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.79■□□□□ 0.76
SLC28A2O43868 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC28A2O43868 AC092118.2-201ENST00000613495 667 ntBASIC19.79■□□□□ 0.76
SLC28A2O43868 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC28A2O43868 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC28A2O43868 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC28A2O43868 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC28A2O43868 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC28A2O43868 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC28A2O43868 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC28A2O43868 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC28A2O43868 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC28A2O43868 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.78■□□□□ 0.76
SLC28A2O43868 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC28A2O43868 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC28A2O43868 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC28A2O43868 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC28A2O43868 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC28A2O43868 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC28A2O43868 AP006587.3-201ENST00000525742 1516 ntBASIC19.77■□□□□ 0.76
SLC28A2O43868 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC28A2O43868 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC28A2O43868 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC28A2O43868 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC28A2O43868 MIPEPP3-201ENST00000412105 444 ntBASIC19.77■□□□□ 0.76
SLC28A2O43868 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC28A2O43868 ECEL1P3-201ENST00000427961 737 ntBASIC19.77■□□□□ 0.76
SLC28A2O43868 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC28A2O43868 AC006058.3-201ENST00000606217 1069 ntBASIC19.77■□□□□ 0.76
SLC28A2O43868 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC28A2O43868 AC010331.1-201ENST00000611423 582 ntBASIC19.77■□□□□ 0.76
SLC28A2O43868 KRT87P-202ENST00000534226 1464 ntBASIC19.77■□□□□ 0.76
SLC28A2O43868 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC28A2O43868 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
SLC28A2O43868 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SLC28A2O43868 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLC28A2O43868 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms