Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 AC133561.5-201ENST00000635547 218 ntBASIC28.22■■■□□ 2.11
SBNO1A3KN83 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 TK2-213ENST00000563369 882 ntTSL 5 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
SBNO1A3KN83 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SBNO1A3KN83 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.11
SBNO1A3KN83 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SBNO1A3KN83 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC28.2■■■□□ 2.11
SBNO1A3KN83 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 GGT1-206ENST00000404223 952 ntTSL 2 BASIC28.2■■■□□ 2.1
SBNO1A3KN83 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC28.2■■■□□ 2.1
SBNO1A3KN83 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SBNO1A3KN83 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SBNO1A3KN83 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SBNO1A3KN83 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SBNO1A3KN83 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 AC110285.5-201ENST00000611501 352 ntBASIC28.19■■■□□ 2.1
SBNO1A3KN83 AC120498.8-201ENST00000614275 531 ntBASIC28.19■■■□□ 2.1
SBNO1A3KN83 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 NARF-205ENST00000412079 1760 ntTSL 5 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC28.19■■■□□ 2.1
SBNO1A3KN83 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SBNO1A3KN83 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC28.18■■■□□ 2.1
SBNO1A3KN83 AC068473.5-201ENST00000616428 2072 ntBASIC28.18■■■□□ 2.1
SBNO1A3KN83 THEM4-205ENST00000489410 643 ntTSL 2 BASIC28.18■■■□□ 2.1
SBNO1A3KN83 PPOX-219ENST00000544598 813 ntTSL 2 BASIC28.18■■■□□ 2.1
SBNO1A3KN83 AL355075.4-201ENST00000554988 638 ntBASIC28.18■■■□□ 2.1
SBNO1A3KN83 RARRES2P10-201ENST00000564312 460 ntBASIC28.18■■■□□ 2.1
SBNO1A3KN83 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SBNO1A3KN83 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC28.18■■■□□ 2.1
SBNO1A3KN83 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SBNO1A3KN83 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SBNO1A3KN83 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SBNO1A3KN83 C9orf163-202ENST00000624034 2573 ntBASIC28.17■■■□□ 2.1
SBNO1A3KN83 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SBNO1A3KN83 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SBNO1A3KN83 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SBNO1A3KN83 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SBNO1A3KN83 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SBNO1A3KN83 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC28.17■■■□□ 2.1
SBNO1A3KN83 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 AC005829.2-201ENST00000571422 1056 ntBASIC28.16■■■□□ 2.1
SBNO1A3KN83 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 AC010542.4-201ENST00000563151 1910 ntBASIC28.16■■■□□ 2.1
SBNO1A3KN83 FAM99A-202ENST00000538190 1989 ntBASIC28.16■■■□□ 2.1
SBNO1A3KN83 AC087633.2-202ENST00000565166 1439 ntBASIC28.16■■■□□ 2.1
SBNO1A3KN83 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 STX5-203ENST00000394690 1568 ntTSL 5 BASIC28.16■■■□□ 2.1
SBNO1A3KN83 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SBNO1A3KN83 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SBNO1A3KN83 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SBNO1A3KN83 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms