Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC139453.1-201ENST00000504027 895 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC245052.6-201ENST00000506567 219 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 DUX4L51-201ENST00000508172 1109 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 MTND6P17-201ENST00000511811 519 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 HPYR1-201ENST00000520457 982 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 MOK-223ENST00000522534 796 ntTSL 3 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 PGA5-205ENST00000541528 867 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 RPS26-203ENST00000552361 623 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC005476.2-201ENST00000555771 509 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 BCO1-203ENST00000564552 949 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 CIAPIN1-214ENST00000569979 896 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 ZNF429-206ENST00000597078 1043 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 MIR6511A2-201ENST00000611011 67 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 MIR6511A3-201ENST00000615389 67 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 MIR6511A4-201ENST00000615860 67 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 MIR6511A1-201ENST00000617664 67 ntBASIC8.72□□□□□ -1.01
SNX18Q96RF0 SOX2-OT-249ENST00000628810 618 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 DPH6-201ENST00000256538 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 BCL2L13-211ENST00000493680 2112 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNX18Q96RF0 TULP3-202ENST00000448120 3076 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.72□□□□□ -1.01
SNX18Q96RF0 LIPT1-202ENST00000393473 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 SLC22A2-201ENST00000366952 3737 ntTSL 5 BASIC8.71□□□□□ -1.01
SNX18Q96RF0 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.71□□□□□ -1.01
SNX18Q96RF0 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 EXOC7P1-201ENST00000509881 2059 ntBASIC8.71□□□□□ -1.01
SNX18Q96RF0 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.01
SNX18Q96RF0 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
SNX18Q96RF0 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 PLSCR4-201ENST00000354952 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
SNX18Q96RF0 AL034417.4-201ENST00000641354 2101 ntBASIC8.71□□□□□ -1.01
SNX18Q96RF0 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SNX18Q96RF0 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
SNX18Q96RF0 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 PPY-201ENST00000225992 460 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 MND1-201ENST00000240488 968 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 SIRPG-203ENST00000344103 1042 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 AL596223.2-201ENST00000413220 434 ntTSL 3 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 TCEAL4-202ENST00000415568 959 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 DSTNP1-201ENST00000419906 465 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 AL162431.1-202ENST00000422858 444 ntTSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 OR4D8P-201ENST00000431137 930 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 KCNH1-IT1-201ENST00000438597 626 ntTSL 3 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 OR7A15P-201ENST00000449848 1009 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC104212.1-201ENST00000472088 613 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 RPL13P6-201ENST00000488133 626 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC116359.1-201ENST00000510731 1099 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 AF250324.1-202ENST00000511785 979 ntTSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 LINC02056-203ENST00000512573 594 ntTSL 3 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC112249.1-201ENST00000513916 436 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC004066.2-201ENST00000514879 572 ntTSL 4 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 AP003063.1-201ENST00000528496 855 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 LINC02467-201ENST00000542804 637 ntTSL 3 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ARHGAP23P1-202ENST00000567025 423 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 RN7SL15P-201ENST00000582825 301 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 TUSC8-202ENST00000607312 628 ntTSL 4 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC068631.1-207ENST00000630315 821 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 AC004381.2-201ENST00000637768 1329 ntBASIC8.71□□□□□ -1.02
SNX18Q96RF0 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ZNF507-202ENST00000355898 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ANKRD45-201ENST00000333279 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SNX18Q96RF0 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 PRNT-202ENST00000418528 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SNX18Q96RF0 PTPN12-203ENST00000415482 2316 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.7□□□□□ -1.02
SNX18Q96RF0 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms