Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 AC073210.2-201ENST00000430369 194 ntBASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 AC093787.1-201ENST00000450396 207 ntBASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 MIR4651-201ENST00000582622 73 ntBASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA1Q9UND3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 KRT16P2-201ENST00000414673 1423 ntBASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 FAM201B-201ENST00000458407 597 ntBASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 AC061975.6-201ENST00000579045 1553 ntBASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA1Q9UND3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA1Q9UND3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 RBM17P2-201ENST00000616397 1405 ntBASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 AC003102.1-202ENST00000563394 1796 ntBASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 AL512625.2-201ENST00000417533 625 ntBASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA1Q9UND3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
NPIPA1Q9UND3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.02■□□□□ 0.63
NPIPA1Q9UND3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPIPA1Q9UND3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.02■□□□□ 0.63
NPIPA1Q9UND3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPIPA1Q9UND3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.02■□□□□ 0.63
NPIPA1Q9UND3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 Z98882.1-201ENST00000622160 2253 ntBASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 BX276092.2-201ENST00000417668 665 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms