Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 SCY1YGL083W 2415 nt1.72□□□□□ -2.13
ATG40Q99325 PDS5YMR076C 3834 nt1.71□□□□□ -2.14
ATG40Q99325 YNL018CYNL018C 1839 nt1.71□□□□□ -2.14
ATG40Q99325 MYO2YOR326W 4725 nt1.71□□□□□ -2.14
ATG40Q99325 SCH9YHR205W 2475 nt1.71□□□□□ -2.14
ATG40Q99325 YGL177WYGL177W 348 nt1.71□□□□□ -2.14
ATG40Q99325 HTD2YHR067W 843 nt1.71□□□□□ -2.14
ATG40Q99325 YJL032WYJL032W 315 nt1.71□□□□□ -2.14
ATG40Q99325 YKE2YLR200W 345 nt1.71□□□□□ -2.14
ATG40Q99325 FYV6YNL133C 522 nt1.71□□□□□ -2.14
ATG40Q99325 ESF2YNR054C 951 nt1.71□□□□□ -2.14
ATG40Q99325 YBR090CYBR090C 369 nt1.71□□□□□ -2.14
ATG40Q99325 SRB4YER022W 2064 nt1.71□□□□□ -2.14
ATG40Q99325 GCN2YDR283C 4980 nt1.71□□□□□ -2.14
ATG40Q99325 PUF4YGL014W 2667 nt1.71□□□□□ -2.14
ATG40Q99325 SDC25YLL016W 3147 nt1.71□□□□□ -2.14
ATG40Q99325 PIG2YIL045W 1617 nt1.7□□□□□ -2.14
ATG40Q99325 SRD1YCR018C 666 nt1.7□□□□□ -2.14
ATG40Q99325 SHR3YDL212W 633 nt1.7□□□□□ -2.14
ATG40Q99325 YER046W-AYER046W-A 330 nt1.7□□□□□ -2.14
ATG40Q99325 BRP1YGL007W 378 nt1.7□□□□□ -2.14
ATG40Q99325 YHL048C-AYHL048C-A 135 nt1.7□□□□□ -2.14
ATG40Q99325 YHR071C-AYHR071C-A 321 nt1.7□□□□□ -2.14
ATG40Q99325 PSF2YJL072C 642 nt1.7□□□□□ -2.14
ATG40Q99325 MAK11YKL021C 1407 nt1.7□□□□□ -2.14
ATG40Q99325 YKL069WYKL069W 543 nt1.7□□□□□ -2.14
ATG40Q99325 VPH2YKL119C 648 nt1.7□□□□□ -2.14
ATG40Q99325 YLR412C-AYLR412C-A 207 nt1.7□□□□□ -2.14
ATG40Q99325 UFE1YOR075W 1041 nt1.7□□□□□ -2.14
ATG40Q99325 HOS4YIL112W 3252 nt1.7□□□□□ -2.14
ATG40Q99325 YBP2YGL060W 1926 nt1.7□□□□□ -2.14
ATG40Q99325 NPR3YHL023C 3441 nt1.69□□□□□ -2.14
ATG40Q99325 MAL33YBR297W 1407 nt1.69□□□□□ -2.14
ATG40Q99325 KEI1YDR367W 666 nt1.69□□□□□ -2.14
ATG40Q99325 YER119C-AYER119C-A 372 nt1.69□□□□□ -2.14
ATG40Q99325 YER172C-AYER172C-A 381 nt1.69□□□□□ -2.14
ATG40Q99325 ARG3YJL088W 1017 nt1.69□□□□□ -2.14
ATG40Q99325 IRC21YMR073C 606 nt1.69□□□□□ -2.14
ATG40Q99325 YNR034W-AYNR034W-A 297 nt1.69□□□□□ -2.14
ATG40Q99325 CSI2YOL007C 1026 nt1.69□□□□□ -2.14
ATG40Q99325 YRO2YBR054W 1035 nt1.69□□□□□ -2.14
ATG40Q99325 YEL1YBL060W 2064 nt1.69□□□□□ -2.14
ATG40Q99325 YRR1YOR162C 2433 nt1.69□□□□□ -2.14
ATG40Q99325 YDR179W-AYDR179W-A 1392 nt1.69□□□□□ -2.14
ATG40Q99325 GIS1YDR096W 2685 nt1.69□□□□□ -2.14
ATG40Q99325 ASI3YNL008C 2031 nt1.68□□□□□ -2.14
ATG40Q99325 URK1YNR012W 1506 nt1.68□□□□□ -2.14
ATG40Q99325 TVP15YDR100W 432 nt1.68□□□□□ -2.14
ATG40Q99325 RPN9YDR427W 1182 nt1.68□□□□□ -2.14
ATG40Q99325 GYP5YPL249C 2685 nt1.68□□□□□ -2.14
ATG40Q99325 NUR1YDL089W 1455 nt1.68□□□□□ -2.14
ATG40Q99325 ART10YLR392C 1557 nt1.68□□□□□ -2.14
ATG40Q99325 MGM1YOR211C 2646 nt1.68□□□□□ -2.14
ATG40Q99325 FUS1YCL027W 1539 nt1.67□□□□□ -2.14
ATG40Q99325 ALY1YKR021W 2748 nt1.67□□□□□ -2.14
ATG40Q99325 UBC13YDR092W 462 nt1.67□□□□□ -2.14
ATG40Q99325 YER107W-AYER107W-A 321 nt1.67□□□□□ -2.14
ATG40Q99325 YMR31YFR049W 372 nt1.67□□□□□ -2.14
ATG40Q99325 EMP24YGL200C 612 nt1.67□□□□□ -2.14
ATG40Q99325 TWF1YGR080W 999 nt1.67□□□□□ -2.14
ATG40Q99325 YJL202CYJL202C 348 nt1.67□□□□□ -2.14
ATG40Q99325 ATG10YLL042C 504 nt1.67□□□□□ -2.14
ATG40Q99325 RGM1YMR182C 636 nt1.67□□□□□ -2.14
ATG40Q99325 YAP7YOL028C 738 nt1.67□□□□□ -2.14
ATG40Q99325 INP51YIL002C 2841 nt1.67□□□□□ -2.14
ATG40Q99325 YOR093CYOR093C 4947 nt1.67□□□□□ -2.14
ATG40Q99325 SET2YJL168C 2202 nt1.67□□□□□ -2.14
ATG40Q99325 ROY1YMR258C 1662 nt1.67□□□□□ -2.14
ATG40Q99325 GIP3YPL137C 3831 nt1.67□□□□□ -2.14
ATG40Q99325 FAB1YFR019W 6837 nt1.66□□□□□ -2.14
ATG40Q99325 DIS3YOL021C 3006 nt1.66□□□□□ -2.14
ATG40Q99325 snR76snR76 109 nt1.66□□□□□ -2.14
ATG40Q99325 YER091C-AYER091C-A 222 nt1.66□□□□□ -2.14
ATG40Q99325 PEA2YER149C 1263 nt1.66□□□□□ -2.14
ATG40Q99325 YGL242CYGL242C 546 nt1.66□□□□□ -2.14
ATG40Q99325 YKL115CYKL115C 393 nt1.66□□□□□ -2.14
ATG40Q99325 MRP49YKL167C 414 nt1.66□□□□□ -2.14
ATG40Q99325 PAU8YAL068C 363 nt1.66□□□□□ -2.14
ATG40Q99325 SIP18YMR175W 240 nt1.66□□□□□ -2.14
ATG40Q99325 PAU20YOL161C 363 nt1.66□□□□□ -2.14
ATG40Q99325 MUD1YBR119W 897 nt1.66□□□□□ -2.14
ATG40Q99325 PUT3YKL015W 2940 nt1.65□□□□□ -2.14
ATG40Q99325 COG3YER157W 2406 nt1.65□□□□□ -2.15
ATG40Q99325 SNA4YDL123W 423 nt1.65□□□□□ -2.15
ATG40Q99325 SLD5YDR489W 885 nt1.65□□□□□ -2.15
ATG40Q99325 VAB2YEL005C 849 nt1.65□□□□□ -2.15
ATG40Q99325 CKA1YIL035C 1119 nt1.65□□□□□ -2.15
ATG40Q99325 TMA10YLR327C 261 nt1.65□□□□□ -2.15
ATG40Q99325 SSY1YDR160W 2559 nt1.65□□□□□ -2.15
ATG40Q99325 CDC60YPL160W 3273 nt1.65□□□□□ -2.15
ATG40Q99325 UTP6YDR449C 1323 nt1.65□□□□□ -2.15
ATG40Q99325 TFB6YOR352W 1032 nt1.64□□□□□ -2.15
ATG40Q99325 BRE5YNR051C 1548 nt1.64□□□□□ -2.15
ATG40Q99325 IRA1YBR140C 9279 nt1.64□□□□□ -2.15
ATG40Q99325 SNU114YKL173W 3027 nt1.64□□□□□ -2.15
ATG40Q99325 ARP5YNL059C 2268 nt1.63□□□□□ -2.15
ATG40Q99325 YCR013CYCR013C 648 nt1.63□□□□□ -2.15
ATG40Q99325 GUK1YDR454C 564 nt1.63□□□□□ -2.15
ATG40Q99325 YGL117WYGL117W 798 nt1.63□□□□□ -2.15
ATG40Q99325 GTR2YGR163W 1026 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms