Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 NTF6G-201ENST00000591094 616 ntBASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN4Q96NZ1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 AC053503.5-201ENST00000601508 636 ntBASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
FOXN4Q96NZ1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 TERF1P2-201ENST00000583350 1212 ntBASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 RARRES2P11-201ENST00000635158 484 ntBASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN4Q96NZ1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 AC006128.1-201ENST00000624704 1661 ntBASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 AC121338.2-201ENST00000622535 1744 ntBASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 AC090192.1-201ENST00000517740 490 ntBASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN4Q96NZ1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 KRT87P-202ENST00000534226 1464 ntBASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms