Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPG11Q96JI7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPG11Q96JI7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPG11Q96JI7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.63■□□□□ 0.41
SPG11Q96JI7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPG11Q96JI7 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.62■□□□□ 0.41
SPG11Q96JI7 AC092865.7-201ENST00000641832 219 ntBASIC17.62■□□□□ 0.41
SPG11Q96JI7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPG11Q96JI7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPG11Q96JI7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPG11Q96JI7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPG11Q96JI7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 AC091799.1-201ENST00000422823 811 ntBASIC17.62■□□□□ 0.41
SPG11Q96JI7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 CD177P1-201ENST00000606252 935 ntBASIC17.62■□□□□ 0.41
SPG11Q96JI7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPG11Q96JI7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.62■□□□□ 0.41
SPG11Q96JI7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.61■□□□□ 0.41
SPG11Q96JI7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPG11Q96JI7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.6■□□□□ 0.41
SPG11Q96JI7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.6■□□□□ 0.41
SPG11Q96JI7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.6■□□□□ 0.41
SPG11Q96JI7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.6■□□□□ 0.41
SPG11Q96JI7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 AC010542.4-201ENST00000563151 1910 ntBASIC17.6■□□□□ 0.41
SPG11Q96JI7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.6■□□□□ 0.41
SPG11Q96JI7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPG11Q96JI7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.59■□□□□ 0.41
SPG11Q96JI7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPG11Q96JI7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPG11Q96JI7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.58■□□□□ 0.4
SPG11Q96JI7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.58■□□□□ 0.4
SPG11Q96JI7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPG11Q96JI7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPG11Q96JI7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPG11Q96JI7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SPG11Q96JI7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPG11Q96JI7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SPG11Q96JI7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SPG11Q96JI7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPG11Q96JI7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPG11Q96JI7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms