Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 POM121L13P-201ENST00000422362 380 ntBASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.27■■□□□ 1.96
RAPGEF4Q8WZA2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.26■■□□□ 1.96
RAPGEF4Q8WZA2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF4Q8WZA2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 C2orf69P4-201ENST00000565394 541 ntBASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 MIR4497-201ENST00000583208 89 ntBASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF4Q8WZA2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 Z99916.2-201ENST00000604037 246 ntBASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC27.24■■□□□ 1.95
RAPGEF4Q8WZA2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF4Q8WZA2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF4Q8WZA2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
RAPGEF4Q8WZA2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.21■■□□□ 1.95
RAPGEF4Q8WZA2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.21■■□□□ 1.95
RAPGEF4Q8WZA2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.21■■□□□ 1.95
RAPGEF4Q8WZA2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC27.21■■□□□ 1.95
RAPGEF4Q8WZA2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RAPGEF4Q8WZA2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC27.2■■□□□ 1.95
RAPGEF4Q8WZA2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
RAPGEF4Q8WZA2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RAPGEF4Q8WZA2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms